BLASTX nr result

ID: Cnidium21_contig00047355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047355
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39646.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002874322.1| hypothetical protein ARALYDRAFT_910739 [Arab...   100   2e-19
ref|NP_001154741.1| nucleic acid binding / zinc ion binding prot...   100   2e-19
ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002512563.1| conserved hypothetical protein [Ricinus comm...    94   1e-17

>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/100 (60%), Positives = 67/100 (67%)
 Frame = +2

Query: 2   FQDTAYARKRHLQGVQHQRAKSLWYHSLRANQNNPSVDSFGTVGVCNRFVTTGSCPYGDS 181
           FQDT  ARKRHLQG+QHQRAK+LWY S R + N    + +G  GVCNRFV TG C YGDS
Sbjct: 15  FQDTPSARKRHLQGLQHQRAKALWYDSFR-DPNQIQAEGYGK-GVCNRFVRTGFCQYGDS 72

Query: 182 CKYLHPKQNPQRTNTSGTAVTNFMDDAQSLDMMERQQAGG 301
           CKY HPKQ+ Q TNT    VT F D+ QSL     Q  GG
Sbjct: 73  CKYFHPKQSLQNTNTQSIPVTGFPDNIQSLSNPGNQLVGG 112


>ref|XP_002874322.1| hypothetical protein ARALYDRAFT_910739 [Arabidopsis lyrata subsp.
           lyrata] gi|297320159|gb|EFH50581.1| hypothetical protein
           ARALYDRAFT_910739 [Arabidopsis lyrata subsp. lyrata]
          Length = 146

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +2

Query: 2   FQDTAYARKRHLQGVQHQRAKSLWYHSLRANQNNPSVDSFGTVGVCNRFVTTGSCPYGDS 181
           FQDT  ARKRHLQ   H RAK+LWY S  ++  NP V +F T G+CNRF+T+  CP+GDS
Sbjct: 15  FQDTQVARKRHLQSKPHLRAKALWYSSSSSDLINPQVSNFATKGLCNRFITSNFCPFGDS 74

Query: 182 CKYLHPKQNPQRT 220
           C+Y HPK NP  T
Sbjct: 75  CRYFHPKNNPGST 87


>ref|NP_001154741.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
           thaliana] gi|332006211|gb|AED93594.1| nucleic acid
           binding / zinc ion binding protein [Arabidopsis
           thaliana]
          Length = 147

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   FQDTAYARKRHLQGVQHQRAKSLWYHSLRANQNNPSVDSFGTVGVCNRFVTTGSCPYGDS 181
           FQDT  ARKRHLQ   H RAK+LWY S  ++  NP V +F T G+CNRF+T+  CP+GDS
Sbjct: 15  FQDTQVARKRHLQSKPHLRAKALWYSSSSSDLVNPQVSNFATKGLCNRFITSNFCPFGDS 74

Query: 182 CKYLHPKQNPQRTNTSGTAVTNFMDDAQ-SLDMMERQQAGGASV 310
           C+Y HP  N        T  T F ++ Q  +DM+ +Q   G+++
Sbjct: 75  CRYFHPNNN--------TGSTGFTNNTQLRVDMLNQQHIQGSTL 110


>ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|222857307|gb|EEE94854.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/106 (51%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
 Frame = +2

Query: 2   FQDTAYARKRHLQGVQHQRAKSLWY----HSLRANQNNPSVDSFGTVGVCNRFVTTGSCP 169
           FQDT +ARKRHLQ   H RAKSLW+    +S   N NN     F   G+CNRFV TG CP
Sbjct: 15  FQDTPHARKRHLQSSSHLRAKSLWFSRNSNSNTLNSNNTDAGGF-VKGLCNRFVKTGFCP 73

Query: 170 YGDSCKYLHPKQNPQRTNTSGTAVTNFMDDAQSLDMMERQQAGGAS 307
           YGDSCKYLH       TN + +  T F D+ QS  M   Q AGG+S
Sbjct: 74  YGDSCKYLH-------TNFATSQGTAFKDNVQSPTMPGNQLAGGSS 112


>ref|XP_002512563.1| conserved hypothetical protein [Ricinus communis]
           gi|223548524|gb|EEF50015.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
 Frame = +2

Query: 2   FQDTAYARKRHLQGVQHQRAKSLWYHSLRAN-------QNNPSVDSFGTVGVCNRFVTTG 160
           FQDT  ARKRHLQ   H R+KS+WY+SL +N         N +   F T GVCNRFV TG
Sbjct: 15  FQDTPIARKRHLQSSSHLRSKSIWYNSLNSNFIDPNQAHTNGAAGGF-TKGVCNRFVKTG 73

Query: 161 SCPYGDSCKYLHPKQNPQRTNTSGTAVTNFMDDAQS 268
            CP+GDSCKYLHP      T T+    T  MD+ QS
Sbjct: 74  FCPFGDSCKYLHP-----TTTTNNLQSTGLMDNPQS 104


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