BLASTX nr result
ID: Cnidium21_contig00047351
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047351 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l... 97 1e-18 emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera] 97 1e-18 ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2... 93 2e-17 ref|NP_195863.1| transducin/WD40 domain-containing protein [Arab... 93 2e-17 ref|XP_002870972.1| WD-40 repeat family protein [Arabidopsis lyr... 90 2e-16 >ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera] Length = 912 Score = 97.4 bits (241), Expect = 1e-18 Identities = 50/104 (48%), Positives = 60/104 (57%) Frame = +3 Query: 9 SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188 +STP+HPMA S DR PL E +SIPDY+++PETVF+L E P Sbjct: 449 NSTPLHPMALGSSDRPPLPETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIP 508 Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320 +CSF GH DDV MDKTVRLWDMETK+CLK+ Sbjct: 509 VCSFKGHLDDVLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKL 552 >emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera] Length = 1068 Score = 97.4 bits (241), Expect = 1e-18 Identities = 50/104 (48%), Positives = 60/104 (57%) Frame = +3 Query: 9 SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188 +STP+HPMA S DR PL E +SIPDY+++PETVF+L E P Sbjct: 407 NSTPLHPMALGSSDRPPLPETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIP 466 Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320 +CSF GH DDV MDKTVRLWDMETK+CLK+ Sbjct: 467 VCSFKGHLDDVLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKL 510 >ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1| predicted protein [Populus trichocarpa] Length = 939 Score = 93.2 bits (230), Expect = 2e-17 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Frame = +3 Query: 15 TPVHP-MAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERPI 191 TP+HP + ++P L E + SE N IP+YV+VPETVF+LSE+P+ Sbjct: 453 TPLHPSLCSSTPS---LGEVTPMSSERKKKWKASSSRKGNPIPEYVHVPETVFSLSEKPV 509 Query: 192 CSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320 CSFTGH DDV MDKTVRLWDMETK+CLK+ Sbjct: 510 CSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDMETKSCLKL 552 >ref|NP_195863.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|7413632|emb|CAB85980.1| putative protein [Arabidopsis thaliana] gi|332003088|gb|AED90471.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 905 Score = 93.2 bits (230), Expect = 2e-17 Identities = 46/104 (44%), Positives = 58/104 (55%) Frame = +3 Query: 9 SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188 S TP+HP S D+ + V + N IPDYV+ PETVF+LS++P Sbjct: 452 SLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKP 511 Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320 ICSFTGH DDV MDKTVRLWD+ET++CLK+ Sbjct: 512 ICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKL 555 >ref|XP_002870972.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297316809|gb|EFH47231.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 906 Score = 90.1 bits (222), Expect = 2e-16 Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 1/105 (0%) Frame = +3 Query: 9 SSTPVHP-MAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSER 185 S TP+HP M+G++ + V + N IPDYV+ PETVF+LS++ Sbjct: 451 SLTPIHPSMSGSTDKSSTECDAAEVSQDKKKKGKTSTSKKGNQIPDYVHAPETVFSLSDK 510 Query: 186 PICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320 PICSFTGH DDV MDKTVRLWD+ET++CLK+ Sbjct: 511 PICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKL 555