BLASTX nr result

ID: Cnidium21_contig00047351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047351
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...    97   1e-18
emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]    97   1e-18
ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|NP_195863.1| transducin/WD40 domain-containing protein [Arab...    93   2e-17
ref|XP_002870972.1| WD-40 repeat family protein [Arabidopsis lyr...    90   2e-16

>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/104 (48%), Positives = 60/104 (57%)
 Frame = +3

Query: 9   SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188
           +STP+HPMA  S DR PL E                    +SIPDY+++PETVF+L E P
Sbjct: 449 NSTPLHPMALGSSDRPPLPETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIP 508

Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320
           +CSF GH DDV               MDKTVRLWDMETK+CLK+
Sbjct: 509 VCSFKGHLDDVLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKL 552


>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/104 (48%), Positives = 60/104 (57%)
 Frame = +3

Query: 9   SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188
           +STP+HPMA  S DR PL E                    +SIPDY+++PETVF+L E P
Sbjct: 407 NSTPLHPMALGSSDRPPLPETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIP 466

Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320
           +CSF GH DDV               MDKTVRLWDMETK+CLK+
Sbjct: 467 VCSFKGHLDDVLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKL 510


>ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = +3

Query: 15  TPVHP-MAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERPI 191
           TP+HP +  ++P    L E   + SE             N IP+YV+VPETVF+LSE+P+
Sbjct: 453 TPLHPSLCSSTPS---LGEVTPMSSERKKKWKASSSRKGNPIPEYVHVPETVFSLSEKPV 509

Query: 192 CSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320
           CSFTGH DDV               MDKTVRLWDMETK+CLK+
Sbjct: 510 CSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDMETKSCLKL 552


>ref|NP_195863.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|7413632|emb|CAB85980.1| putative protein [Arabidopsis
           thaliana] gi|332003088|gb|AED90471.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 905

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/104 (44%), Positives = 58/104 (55%)
 Frame = +3

Query: 9   SSTPVHPMAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSERP 188
           S TP+HP    S D+    +   V  +             N IPDYV+ PETVF+LS++P
Sbjct: 452 SLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKP 511

Query: 189 ICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320
           ICSFTGH DDV               MDKTVRLWD+ET++CLK+
Sbjct: 512 ICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKL 555


>ref|XP_002870972.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316809|gb|EFH47231.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 906

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +3

Query: 9   SSTPVHP-MAGTSPDRLPLAENNSVPSEXXXXXXXXXXXXXNSIPDYVNVPETVFALSER 185
           S TP+HP M+G++       +   V  +             N IPDYV+ PETVF+LS++
Sbjct: 451 SLTPIHPSMSGSTDKSSTECDAAEVSQDKKKKGKTSTSKKGNQIPDYVHAPETVFSLSDK 510

Query: 186 PICSFTGHQDDVXXXXXXXXXXXXXXXMDKTVRLWDMETKNCLKM 320
           PICSFTGH DDV               MDKTVRLWD+ET++CLK+
Sbjct: 511 PICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKL 555


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