BLASTX nr result

ID: Cnidium21_contig00047342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047342
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/102 (71%), Positives = 89/102 (87%)
 Frame = +1

Query: 1   IDLLGRSGRLKEAWDFIQNMPVEPGINVLGAMLGACKIHKNVDLGELAANKLFAMNPEEG 180
           +DLLGR+GR+KEAWDFI+NMP+ PGI V GAMLGACKIHKN+++GE AA KLF +NP+EG
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEG 653

Query: 181 GYHVLLANIYSNAAMWDKVAEVRNTMVNKGIQKTPGCSLVNL 306
           GYHVLLANIY++ + W KVAEVR TM  KG++KTPGCS+V L
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  161 bits (407), Expect = 6e-38
 Identities = 71/102 (69%), Positives = 87/102 (85%)
 Frame = +1

Query: 1   IDLLGRSGRLKEAWDFIQNMPVEPGINVLGAMLGACKIHKNVDLGELAANKLFAMNPEEG 180
           +DLLGR+GR+KEAWDFI+NMP+ PGI V GA  GACKIHKN+++GE AA KLF +NP+EG
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEG 653

Query: 181 GYHVLLANIYSNAAMWDKVAEVRNTMVNKGIQKTPGCSLVNL 306
           GYHVLLANIY++ + W KVAEVR TM  KG++KTPGCS+V L
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/102 (71%), Positives = 90/102 (88%)
 Frame = +1

Query: 1   IDLLGRSGRLKEAWDFIQNMPVEPGINVLGAMLGACKIHKNVDLGELAANKLFAMNPEEG 180
           +DLLGR+GRL +AW FIQ+MPV+PGI VLGAMLGAC+IHKNV+LGE  A++LF ++P++G
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648

Query: 181 GYHVLLANIYSNAAMWDKVAEVRNTMVNKGIQKTPGCSLVNL 306
           GYHVLLAN+Y++A+MWDKVA VR  M  KGIQKTPGCSLV L
Sbjct: 649 GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVEL 690


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = +1

Query: 1   IDLLGRSGRLKEAWDFIQNMPVEPGINVLGAMLGACKIHKNVDLGELAANKLFAMNPEEG 180
           +DLLGR+ RL EAWDFIQ MP+EP I+V GAMLGAC+IHKNV+LGE AAN++F ++P++G
Sbjct: 622 VDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDG 681

Query: 181 GYHVLLANIYSNAAMWDKVAEVRNTMVNKGIQKTPGCSLVNL 306
           GYHVLLANIY+ A+MWDKVA VR TM  KGIQKTPG S+V L
Sbjct: 682 GYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVEL 723


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  160 bits (404), Expect = 1e-37
 Identities = 72/102 (70%), Positives = 87/102 (85%)
 Frame = +1

Query: 1   IDLLGRSGRLKEAWDFIQNMPVEPGINVLGAMLGACKIHKNVDLGELAANKLFAMNPEEG 180
           +DLLGR+GRL +AWDFIQ MP++PGI V GAMLGACKIHKNVDLGE AA ++F +NP++G
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536

Query: 181 GYHVLLANIYSNAAMWDKVAEVRNTMVNKGIQKTPGCSLVNL 306
           GYHVLLANIY+ A+MW KVA+VR  M   G+QKTPGCSLV +
Sbjct: 537 GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEI 578


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