BLASTX nr result

ID: Cnidium21_contig00047291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047291
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, AB...   160   1e-37
ref|XP_002872874.1| P-glycoprotein 5 [Arabidopsis lyrata subsp. ...   159   3e-37
ref|NP_192091.1| ABC transporter B family member 3 [Arabidopsis ...   159   3e-37
emb|CAA75922.1| P-glycoprotein-like protein [Arabidopsis thaliana]    159   3e-37
ref|NP_171753.1| P-glycoprotein 11 [Arabidopsis thaliana] gi|753...   158   4e-37

>ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222843273|gb|EEE80820.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1224

 Score =  160 bits (405), Expect = 1e-37
 Identities = 85/87 (97%), Positives = 87/87 (100%)
 Frame = -3

Query: 262  GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
            GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALD+VMV
Sbjct: 1107 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVMV 1166

Query: 82   NRTTVVVAHRLSTIKSADVIAVVKNGV 2
            NRTTVVVAHRLSTIK+ADVIAVVKNGV
Sbjct: 1167 NRTTVVVAHRLSTIKNADVIAVVKNGV 1193



 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/86 (76%), Positives = 80/86 (93%)
 Frame = -3

Query: 262 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
           G DT+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESER+VQ+ALD++MV
Sbjct: 451 GIDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMV 510

Query: 82  NRTTVVVAHRLSTIKSADVIAVVKNG 5
           NRTTV+VAHRLST+++AD+IAV+  G
Sbjct: 511 NRTTVIVAHRLSTVRNADMIAVIYRG 536


>ref|XP_002872874.1| P-glycoprotein 5 [Arabidopsis lyrata subsp. lyrata]
            gi|297318711|gb|EFH49133.1| P-glycoprotein 5 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1230

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = -3

Query: 262  GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
            GYDTVVGERGIQLSGGQKQRVAIARAIVK PKILLLDEATSALDAESERVVQDALD+VMV
Sbjct: 1114 GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMV 1173

Query: 82   NRTTVVVAHRLSTIKSADVIAVVKNGV 2
            NRTTVVVAHRLSTIK+ADVIAVVKNGV
Sbjct: 1174 NRTTVVVAHRLSTIKNADVIAVVKNGV 1200



 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/86 (77%), Positives = 79/86 (91%)
 Frame = -3

Query: 262 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
           G +T+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESERVVQ+ALD+VMV
Sbjct: 480 GLETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMV 539

Query: 82  NRTTVVVAHRLSTIKSADVIAVVKNG 5
           NRTTV+VAHRLST+++AD IAV+  G
Sbjct: 540 NRTTVIVAHRLSTVRNADTIAVIHRG 565


>ref|NP_192091.1| ABC transporter B family member 3 [Arabidopsis thaliana]
            gi|75337854|sp|Q9SYI2.1|AB3B_ARATH RecName: Full=ABC
            transporter B family member 3; Short=ABC transporter
            ABCB.3; Short=AtABCB3; AltName: Full=P-glycoprotein 3;
            AltName: Full=Putative multidrug resistance protein 3
            gi|4558551|gb|AAD22644.1|AC007138_8 P-glycoprotein-like
            protein [Arabidopsis thaliana] gi|7268566|emb|CAB80675.1|
            P-glycoprotein-like protein pgp3 [Arabidopsis thaliana]
            gi|332656681|gb|AEE82081.1| ABC transporter B family
            member 3 [Arabidopsis thaliana]
          Length = 1229

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = -3

Query: 262  GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
            GYDTVVGERGIQLSGGQKQRVAIARAIVK PKILLLDEATSALDAESERVVQDALD+VMV
Sbjct: 1113 GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMV 1172

Query: 82   NRTTVVVAHRLSTIKSADVIAVVKNGV 2
            NRTTVVVAHRLSTIK+ADVIAVVKNGV
Sbjct: 1173 NRTTVVVAHRLSTIKNADVIAVVKNGV 1199



 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/86 (75%), Positives = 80/86 (93%)
 Frame = -3

Query: 262 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
           G +T+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESERVVQ+ALD+VM+
Sbjct: 475 GLETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMM 534

Query: 82  NRTTVVVAHRLSTIKSADVIAVVKNG 5
           +RTTV+VAHRLST+++AD+IAV+  G
Sbjct: 535 SRTTVIVAHRLSTVRNADMIAVIHRG 560


>emb|CAA75922.1| P-glycoprotein-like protein [Arabidopsis thaliana]
          Length = 1229

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = -3

Query: 262  GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
            GYDTVVGERGIQLSGGQKQRVAIARAIVK PKILLLDEATSALDAESERVVQDALD+VMV
Sbjct: 1113 GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMV 1172

Query: 82   NRTTVVVAHRLSTIKSADVIAVVKNGV 2
            NRTTVVVAHRLSTIK+ADVIAVVKNGV
Sbjct: 1173 NRTTVVVAHRLSTIKNADVIAVVKNGV 1199



 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/86 (75%), Positives = 80/86 (93%)
 Frame = -3

Query: 262 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
           G +T+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESERVVQ+ALD+VM+
Sbjct: 475 GLETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMM 534

Query: 82  NRTTVVVAHRLSTIKSADVIAVVKNG 5
           +RTTV+VAHRLST+++AD+IAV+  G
Sbjct: 535 SRTTVIVAHRLSTVRNADMIAVIHRG 560


>ref|NP_171753.1| P-glycoprotein 11 [Arabidopsis thaliana]
            gi|75334433|sp|Q9FWX7.1|AB11B_ARATH RecName: Full=ABC
            transporter B family member 11; Short=ABC transporter
            ABCB.11; Short=AtABCB11; AltName: Full=Multidrug
            resistance protein 8; AltName: Full=P-glycoprotein 11
            gi|9972378|gb|AAG10628.1|AC022521_6 Putative ABC
            transporter [Arabidopsis thaliana]
            gi|332189319|gb|AEE27440.1| P-glycoprotein 11
            [Arabidopsis thaliana]
          Length = 1278

 Score =  158 bits (400), Expect = 4e-37
 Identities = 83/87 (95%), Positives = 86/87 (98%)
 Frame = -3

Query: 262  GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
            GYDTVVGERGIQLSGGQKQRVAIARAIVK PKILLLDEATSALDAESERVVQDALD+VMV
Sbjct: 1162 GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMV 1221

Query: 82   NRTTVVVAHRLSTIKSADVIAVVKNGV 2
            NRTT+VVAHRLSTIK+ADVIAVVKNGV
Sbjct: 1222 NRTTIVVAHRLSTIKNADVIAVVKNGV 1248



 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = -3

Query: 262 GYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDQVMV 83
           G DT+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESERVVQ+ALD+VMV
Sbjct: 508 GLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMV 567

Query: 82  NRTTVVVAHRLSTIKSADVIAVVKNG 5
           NRTTV+VAHRLST+++AD+IAV+  G
Sbjct: 568 NRTTVIVAHRLSTVRNADMIAVIHRG 593


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