BLASTX nr result

ID: Cnidium21_contig00047255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047255
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37991.1| unknown [Medicago truncatula]                           75   7e-12
ref|NP_198862.1| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-10
gb|AAM63698.1| unknown [Arabidopsis thaliana]                          64   2e-10
ref|XP_002273869.1| PREDICTED: uncharacterized protein LOC100266...    60   3e-10
ref|XP_002315674.1| predicted protein [Populus trichocarpa] gi|2...    56   5e-09

>gb|AFK37991.1| unknown [Medicago truncatula]
          Length = 116

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/87 (47%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
 Frame = -2

Query: 335 MGYSKKAVKMEGEVETEG--KKYILT--ALRSPLKPIHTNTDDNKKECDEMHEQVEYDEE 168
           MGYS+KA  +EG  E+E   +K+++   ALR+PLKPI TN+ + +++     E+VE + E
Sbjct: 1   MGYSEKAQVVEGGFESENNSRKWVIAGIALRAPLKPIQTNSIEKEQQ----KEEVEIEIE 56

Query: 167 KCTTPTSDESRIPTSRFFQCPGAPKKR 87
           +C+TPT++ES+IPTS  F CP AP+K+
Sbjct: 57  ECSTPTNEESKIPTS--FTCPPAPRKQ 81


>ref|NP_198862.1| uncharacterized protein [Arabidopsis thaliana]
           gi|88900376|gb|ABD57500.1| At5g40460 [Arabidopsis
           thaliana] gi|332007167|gb|AED94550.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 112

 Score = 63.5 bits (153), Expect(2) = 2e-10
 Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
 Frame = -2

Query: 335 MGYSKKAVKMEGEVETEGKKYILT--ALRSPLKPIHTNTDDNKKECDEMHEQVEYDEEKC 162
           MG+SKK+ + EG +E++GKK+++   ++R+ LKP+ T      +   E+ E    +EE+C
Sbjct: 1   MGFSKKS-QFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEEC 59

Query: 161 -TTPTSDESRIPTSRFFQCPGAPKKRNQVQTSISLVIR 51
            TTPT+ E++IP     +CP AP+KR       S V+R
Sbjct: 60  STTPTAKETKIP--ELLECPPAPRKRRPALKCRSNVVR 95



 Score = 26.6 bits (57), Expect(2) = 2e-10
 Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = -1

Query: 51  NVGREFFSPP-ELETLFM 1
           NV REFF+PP +LET+F+
Sbjct: 92  NVVREFFTPPSDLETVFL 109


>gb|AAM63698.1| unknown [Arabidopsis thaliana]
          Length = 112

 Score = 63.5 bits (153), Expect(2) = 2e-10
 Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
 Frame = -2

Query: 335 MGYSKKAVKMEGEVETEGKKYILT--ALRSPLKPIHTNTDDNKKECDEMHEQVEYDEEKC 162
           MG+SKK+ + EG +E++GKK+++   ++R+ LKP+ T      +   E+ E    +EE+C
Sbjct: 1   MGFSKKS-QFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEEC 59

Query: 161 -TTPTSDESRIPTSRFFQCPGAPKKRNQVQTSISLVIR 51
            TTPT+ E++IP     +CP AP+KR       S V+R
Sbjct: 60  STTPTAKETKIP--ELLECPPAPRKRRPALKCRSNVVR 95



 Score = 26.6 bits (57), Expect(2) = 2e-10
 Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = -1

Query: 51  NVGREFFSPP-ELETLFM 1
           NV REFF+PP +LET+F+
Sbjct: 92  NVVREFFTPPSDLETVFL 109


>ref|XP_002273869.1| PREDICTED: uncharacterized protein LOC100266480 [Vitis vinifera]
          Length = 107

 Score = 59.7 bits (143), Expect(2) = 3e-10
 Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
 Frame = -2

Query: 335 MGYSKKAVKMEGEVETEGKKYILTA--LRSPLKPIHTNTDDNKKECDEMHEQVEYDEEKC 162
           MG   + ++++G +E+E KK++++   LR+PLKP++T+     KE DE       + E+C
Sbjct: 1   MGLFAEKLQVDGGLESENKKWVISGIQLRAPLKPVYTSPVG--KERDE-------EGEEC 51

Query: 161 TTPTSDESRIPTSRFFQCPGAPKKR 87
           +TPT +E+RIPT+    CP AP+KR
Sbjct: 52  STPTYEEARIPTT--LTCPPAPRKR 74



 Score = 29.6 bits (65), Expect(2) = 3e-10
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -1

Query: 57  NKNVGREFFSPPELETLFM 1
           N N  REFF+PP+LET+F+
Sbjct: 81  NYNGVREFFTPPDLETVFI 99


>ref|XP_002315674.1| predicted protein [Populus trichocarpa] gi|222864714|gb|EEF01845.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score = 56.2 bits (134), Expect(2) = 5e-09
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
 Frame = -2

Query: 335 MGYSKKAVKMEGEVETEG-KKYILTA--LRSPLKPIHTNTDDNKKECDEMHEQVEYDEEK 165
           MG+SKK   ++G ++ +G K++++    LR+PLKPI TN  +  KE +E     + D+  
Sbjct: 1   MGFSKKPPAVDGGLDLDGGKRWVIAGIPLRAPLKPISTNPVE--KEINE-----DDDQSN 53

Query: 164 CTT----PTSDESRIPTSRFFQCPGAPKKR 87
           CTT    PTS+E+RIP+     CP AP+KR
Sbjct: 54  CTTASTTPTSEEARIPSR--LVCPPAPRKR 81



 Score = 29.3 bits (64), Expect(2) = 5e-09
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -1

Query: 42  REFFSPPELETLFM 1
           REFF+PP+LETLF+
Sbjct: 94  REFFTPPDLETLFV 107