BLASTX nr result

ID: Cnidium21_contig00047245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047245
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314093.1| GRAS family transcription factor [Populus tr...   129   3e-28
ref|XP_002516708.1| transcription factor, putative [Ricinus comm...   127   1e-27
ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vi...   122   4e-26
gb|AFH54559.1| GRAS family protein, partial [Dimocarpus longan]       118   6e-25
ref|XP_003540398.1| PREDICTED: scarecrow-like protein 3-like iso...   116   2e-24

>ref|XP_002314093.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850501|gb|EEE88048.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 470

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/116 (58%), Positives = 83/116 (71%)
 Frame = -3

Query: 351 PVVSKLENLDIEQLRVKTGEALAISSVLQLHSLLSPVDEPHKRSPLTSMKSSGVNMLRAS 172
           P+VSKLENLDIE LRVKTGEALAISS+LQLHS L+  DE  K+SP T   S+G+NM R  
Sbjct: 219 PIVSKLENLDIEILRVKTGEALAISSILQLHSFLASDDELRKKSPSTLKNSNGINMQRVL 278

Query: 171 QIKQSTLGDLLQKDMVNGQSTGXXXXXXXXXXXXXAVQIDGFLNALWGLSPKVMVV 4
           Q+ Q+TLG+LL+KD  NG S               +V++D FLN+LWGLSPK+MVV
Sbjct: 279 QMNQNTLGELLEKDTANGYSPSPDSASSSPLSSTASVKMDCFLNSLWGLSPKLMVV 334


>ref|XP_002516708.1| transcription factor, putative [Ricinus communis]
           gi|223544203|gb|EEF45727.1| transcription factor,
           putative [Ricinus communis]
          Length = 451

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/116 (58%), Positives = 82/116 (70%)
 Frame = -3

Query: 351 PVVSKLENLDIEQLRVKTGEALAISSVLQLHSLLSPVDEPHKRSPLTSMKSSGVNMLRAS 172
           P+VSKLENLDIE+LRVKTGEALAISSVLQLHS L+  DE  KRSP+T   S+G+++ R  
Sbjct: 200 PIVSKLENLDIEKLRVKTGEALAISSVLQLHSFLASDDELRKRSPVTLKNSNGMHLQRVL 259

Query: 171 QIKQSTLGDLLQKDMVNGQSTGXXXXXXXXXXXXXAVQIDGFLNALWGLSPKVMVV 4
              Q TLG+LL+KDMVNG S               +V++D FLN LW LSPK+MVV
Sbjct: 260 PANQGTLGELLEKDMVNGYSPSSHSTSSSPLSSTASVKMDYFLNTLWSLSPKLMVV 315


>ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vitis vinifera]
           gi|147775853|emb|CAN60488.1| hypothetical protein
           VITISV_027673 [Vitis vinifera]
          Length = 469

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = -3

Query: 351 PVVSKLENLDIEQLRVKTGEALAISSVLQLHSLLSPVDE-PHKRSPLTSMKSSGVNMLRA 175
           P+VSKLENLD E+LRVKTGEALAISSVLQLHS L+  DE   K+SPL S  S+GV + R 
Sbjct: 217 PIVSKLENLDFEKLRVKTGEALAISSVLQLHSFLAYDDEFLRKKSPLASKNSNGVQLQRV 276

Query: 174 SQIKQSTLGDLLQKDMVNGQSTGXXXXXXXXXXXXXAVQIDGFLNALWGLSPKVMVV 4
            Q+ Q+TLG+LL+ D+VN  S               + ++DGFLNALWGL+PK+MV+
Sbjct: 277 LQLNQTTLGELLENDVVNRYSLSPDSASSSPPSFTGSPKMDGFLNALWGLTPKLMVI 333


>gb|AFH54559.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 226

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = -3

Query: 348 VVSKLENLDIEQLRVKTGEALAISSVLQLHSLLSPVDE-PHKRSPLTSMKSSGVNMLRAS 172
           +VSKLENLD+E+LRVKTGEALAI S LQLH++L+  DE   KRSPL S  S+ V++ R  
Sbjct: 81  IVSKLENLDLEKLRVKTGEALAICSTLQLHTILASDDELLRKRSPLASKNSNSVHLQRVL 140

Query: 171 QIKQSTLGDLLQKDMVNGQSTGXXXXXXXXXXXXXAVQIDGFLNALWGLSPKVMVV 4
           Q+ QST+G+L +KD+ NG S               ++Q+D FLN+LWGLSPK+MVV
Sbjct: 141 QMNQSTIGELFEKDLGNGYSPTTDSASSSPVSPHASIQMDSFLNSLWGLSPKLMVV 196


>ref|XP_003540398.1| PREDICTED: scarecrow-like protein 3-like isoform 2 [Glycine max]
          Length = 477

 Score =  116 bits (290), Expect = 2e-24
 Identities = 66/119 (55%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = -3

Query: 351 PVVSKLENLDIEQLRVKTGEALAISSVLQLHSLLSPVDEP-HKRSPLTSMKSSGVNMLRA 175
           PV SKLENLD ++LRVKTGEALAISS+LQLH+LL+  DE   ++SPL    S+G+++ R 
Sbjct: 223 PVASKLENLDFDKLRVKTGEALAISSILQLHTLLAWDDEAMQRKSPLLLKSSNGIHLQRV 282

Query: 174 SQIKQSTLGDLLQKDMVNG--QSTGXXXXXXXXXXXXXAVQIDGFLNALWGLSPKVMVV 4
             + QSTLGDLL+KDMVNG   S               ++ ++ FLNALWGLSPKVMVV
Sbjct: 283 LPMGQSTLGDLLEKDMVNGYTPSPDSTSSSPSSLTTSNSMNMESFLNALWGLSPKVMVV 341


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