BLASTX nr result

ID: Cnidium21_contig00047231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047231
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155968.1| PREDICTED: LOW QUALITY PROTEIN: nodulation-s...   160   1e-37
ref|XP_004141813.1| PREDICTED: nodulation-signaling pathway 1 pr...   160   1e-37
gb|ABD72966.1| GRAS16 [Solanum lycopersicum]                          153   1e-35
ref|XP_002299589.1| GRAS family transcription factor [Populus tr...   152   2e-35
gb|ABJ51763.1| nodulation signaling pathway 1-like protein [Nico...   150   8e-35

>ref|XP_004155968.1| PREDICTED: LOW QUALITY PROTEIN: nodulation-signaling pathway 1
           protein-like [Cucumis sativus]
          Length = 555

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 FASAKPRFFKDSLIYINDINPWFTIPNNIANAXXXXXXXXXXS-PQNLHIIDIGVSHGVQ 228
           FAS  PRFF+ SLI  ++++PWF  PNNIAN+          + P+NLHI+DIGVSHGVQ
Sbjct: 234 FASTDPRFFQRSLIKFHEVSPWFAFPNNIANSSILHILSEESNRPRNLHILDIGVSHGVQ 293

Query: 227 WPTLLDGLTRRPGGPPKLVRLTVIAPPSDSNQSIEIPFAVGPPGYSSVPQLTAYAKTLNI 48
           WPTLL+ LTRR GGPP L+RLTVIAP  + +Q+ E PF++GPPG +   +L ++AK+LNI
Sbjct: 294 WPTLLEALTRRSGGPPPLIRLTVIAPTIEHDQNTETPFSIGPPGDNISSRLLSFAKSLNI 353

Query: 47  NLHINVLEAHSLPSL 3
           NL IN L+ HSL SL
Sbjct: 354 NLQINRLDIHSLQSL 368


>ref|XP_004141813.1| PREDICTED: nodulation-signaling pathway 1 protein-like [Cucumis
           sativus]
          Length = 555

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 FASAKPRFFKDSLIYINDINPWFTIPNNIANAXXXXXXXXXXS-PQNLHIIDIGVSHGVQ 228
           FAS  PRFF+ SLI  ++++PWF  PNNIAN+          + P+NLHI+DIGVSHGVQ
Sbjct: 234 FASTDPRFFQRSLIKFHEVSPWFAFPNNIANSSILHILSEESNRPRNLHILDIGVSHGVQ 293

Query: 227 WPTLLDGLTRRPGGPPKLVRLTVIAPPSDSNQSIEIPFAVGPPGYSSVPQLTAYAKTLNI 48
           WPTLL+ LTRR GGPP L+RLTVIAP  + +Q+ E PF++GPPG +   +L ++AK+LNI
Sbjct: 294 WPTLLEALTRRSGGPPPLIRLTVIAPTIEHDQNTETPFSIGPPGDNISSRLLSFAKSLNI 353

Query: 47  NLHINVLEAHSLPSL 3
           NL IN L+ HSL SL
Sbjct: 354 NLQINRLDIHSLQSL 368


>gb|ABD72966.1| GRAS16 [Solanum lycopersicum]
          Length = 420

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/134 (55%), Positives = 92/134 (68%)
 Frame = -2

Query: 404 FASAKPRFFKDSLIYINDINPWFTIPNNIANAXXXXXXXXXXSPQNLHIIDIGVSHGVQW 225
           F+SA  +FF+DSLI   D++PWF IPNNIAN+            +NLHI+DIGVSHG QW
Sbjct: 108 FSSANHKFFRDSLINFIDVSPWFRIPNNIANSSVLQIIGQQDRLKNLHILDIGVSHGFQW 167

Query: 224 PTLLDGLTRRPGGPPKLVRLTVIAPPSDSNQSIEIPFAVGPPGYSSVPQLTAYAKTLNIN 45
           PTLL+ LTRR GGPP LVRLTVI P +++ +    PF +GPPGY    QL AYAK +NIN
Sbjct: 168 PTLLEELTRRSGGPPPLVRLTVITPTTENGELTGTPFVIGPPGYDFSSQLLAYAKAININ 227

Query: 44  LHINVLEAHSLPSL 3
           L IN L+   L +L
Sbjct: 228 LQINRLDNFPLQNL 241


>ref|XP_002299589.1| GRAS family transcription factor [Populus trichocarpa]
           gi|66947640|emb|CAJ00014.1| Nodulation Signaling Pathway
           1 protein homologue 1 [Populus trichocarpa]
           gi|222846847|gb|EEE84394.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 556

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 FASAKPRFFKDSLIYINDINPWFTIPNNIANAXXXXXXXXXXSPQ-NLHIIDIGVSHGVQ 228
           FAS +P+FF+ SL+   +++PWF  P+NIANA           P+ NLH++DIGVSHGVQ
Sbjct: 234 FASTEPKFFQKSLLKFYEVSPWFAFPHNIANASILQVLAQEQDPRRNLHVLDIGVSHGVQ 293

Query: 227 WPTLLDGLTRRPGGPPKLVRLTVIAPPSDSNQSIEIPFAVGPPGYSSVPQLTAYAKTLNI 48
           WPTLL+ LTRRPGGPP LVR+TVI   S+++Q+ E PF++GPPG +   +L  +AK++NI
Sbjct: 294 WPTLLEALTRRPGGPPPLVRITVITAASENDQTTETPFSIGPPGDNFSSRLLGFAKSMNI 353

Query: 47  NLHINVLEAHSLPSL 3
           NL I  L+ HSL  L
Sbjct: 354 NLQIKRLDNHSLQKL 368


>gb|ABJ51763.1| nodulation signaling pathway 1-like protein [Nicotiana benthamiana]
          Length = 537

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/133 (55%), Positives = 92/133 (69%)
 Frame = -2

Query: 401 ASAKPRFFKDSLIYINDINPWFTIPNNIANAXXXXXXXXXXSPQNLHIIDIGVSHGVQWP 222
           +SA  +FF+DSLI  NDI+PWF IPN+IAN+             NLHI+DIGVSHGVQWP
Sbjct: 223 SSATHKFFRDSLINFNDISPWFRIPNSIANSSVLQILGEQDKLNNLHILDIGVSHGVQWP 282

Query: 221 TLLDGLTRRPGGPPKLVRLTVIAPPSDSNQSIEIPFAVGPPGYSSVPQLTAYAKTLNINL 42
           TLL  LTRR GGPP LVRLTVI P +++ +    PF +GPPGY+   QL A+AK +N+NL
Sbjct: 283 TLLKELTRRSGGPPPLVRLTVITPTTENGEFRGTPFVIGPPGYNFSSQLLAFAKAINVNL 342

Query: 41  HINVLEAHSLPSL 3
            IN L+   L +L
Sbjct: 343 QINRLDNFPLQNL 355


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