BLASTX nr result
ID: Cnidium21_contig00047230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047230
(415 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 246 1e-63
emb|CBI36671.3| unnamed protein product [Vitis vinifera] 244 7e-63
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 244 7e-63
ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|2... 244 7e-63
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 244 7e-63
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 246 bits (628), Expect = 1e-63
Identities = 115/138 (83%), Positives = 130/138 (94%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQN +EAC+WL YTY+Y+RMLRNPTLYG
Sbjct: 542 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYG 601
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
LAPD L++DI LEERR DLIHS+AT L++N+L+KYD++SGYF VTDLGRIASYYY++ GT
Sbjct: 602 LAPDVLTRDITLEERRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 661
Query: 55 ISTYNEHLKPTMGDIELC 2
ISTYNEHLKPTMGDIELC
Sbjct: 662 ISTYNEHLKPTMGDIELC 679
Score = 72.4 bits (176), Expect = 4e-11
Identities = 40/128 (31%), Positives = 67/128 (52%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YY + + P+ES L D NAE+V G ++N ++A +LT+T+MY R+ +NP Y
Sbjct: 1380 YYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1439
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L + L + +L+ + + LE + + ++ +LG IASYYY+S T
Sbjct: 1440 LQGVSHRH---LSDHLSELVENTLSDLEASKCVAIEEDMD-LSPLNLGMIASYYYISYTT 1495
Query: 55 ISTYNEHL 32
I ++ L
Sbjct: 1496 IERFSSSL 1503
>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
Length = 1405
Score = 244 bits (622), Expect = 7e-63
Identities = 116/138 (84%), Positives = 129/138 (93%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQN +EACSW+ YTY+YVRMLRNPTLYG
Sbjct: 704 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYG 763
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L+ DAL++DI LEERR DLIHSAA L+RN+L+KYD++SGYF VTDLGRIASYYY++ GT
Sbjct: 764 LSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 823
Query: 55 ISTYNEHLKPTMGDIELC 2
ISTYNEHLKPTMGDIELC
Sbjct: 824 ISTYNEHLKPTMGDIELC 841
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 244 bits (622), Expect = 7e-63
Identities = 116/138 (84%), Positives = 129/138 (93%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQN +EACSW+ YTY+YVRMLRNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYG 968
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L+ DAL++DI LEERR DLIHSAA L+RN+L+KYD++SGYF VTDLGRIASYYY++ GT
Sbjct: 969 LSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 55 ISTYNEHLKPTMGDIELC 2
ISTYNEHLKPTMGDIELC
Sbjct: 1029 ISTYNEHLKPTMGDIELC 1046
Score = 72.8 bits (177), Expect = 3e-11
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YY + + P+ES L D LNAEIV+G ++N ++A +LT+T+MY R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1806
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L + L + + + + + LE + + + +LG IASYYY+S T
Sbjct: 1807 LQGVSHRH---LSDHLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1862
Query: 55 ISTYNEHL 32
I ++ L
Sbjct: 1863 IERFSSSL 1870
>ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|222859398|gb|EEE96945.1|
predicted protein [Populus trichocarpa]
Length = 2175
Score = 244 bits (622), Expect = 7e-63
Identities = 114/138 (82%), Positives = 129/138 (93%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YYLSLMNQQLPIESQFVSKLADQLNAEIVLG+VQN +EAC WL YTY+YVRM+RNPTLYG
Sbjct: 902 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGSVQNAREACHWLEYTYLYVRMMRNPTLYG 961
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
LAPD L++DI LEERR DLIHSAAT L++N+L+KYD++SGYF VTDLGRIASYYY++ GT
Sbjct: 962 LAPDVLTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1021
Query: 55 ISTYNEHLKPTMGDIELC 2
+STYNEHLKPTMGDIELC
Sbjct: 1022 MSTYNEHLKPTMGDIELC 1039
Score = 72.8 bits (177), Expect = 3e-11
Identities = 40/130 (30%), Positives = 68/130 (52%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YY +++ P+ES+ L D NAE+V G ++N ++A +LT+T+MY R+ +NP Y
Sbjct: 1743 YYKKFLHEAFPVESRLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1802
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L + L + +L+ + LE++ + + +LG IAS YY+S T
Sbjct: 1803 LQGVSHRH---LSDHLSELVENTLADLEKSKCVAIEDDMD-LSPLNLGMIASCYYISYTT 1858
Query: 55 ISTYNEHLKP 26
I ++ L P
Sbjct: 1859 IERFSSSLTP 1868
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 244 bits (622), Expect = 7e-63
Identities = 116/138 (84%), Positives = 129/138 (93%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQN +EACSW+ YTY+YVRMLRNPTLYG
Sbjct: 876 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYG 935
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L+ DAL++DI LEERR DLIHSAA L+RN+L+KYD++SGYF VTDLGRIASYYY++ GT
Sbjct: 936 LSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 995
Query: 55 ISTYNEHLKPTMGDIELC 2
ISTYNEHLKPTMGDIELC
Sbjct: 996 ISTYNEHLKPTMGDIELC 1013
Score = 72.8 bits (177), Expect = 3e-11
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = -1
Query: 415 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNVKEACSWLTYTYMYVRMLRNPTLYG 236
YY + + P+ES L D LNAEIV+G ++N ++A +LT+T+MY R+ +NP Y
Sbjct: 1714 YYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1773
Query: 235 LAPDALSKDILLEERRYDLIHSAATTLERNSLIKYDKRSGYFHVTDLGRIASYYYVSQGT 56
L + L + + + + + LE + + + +LG IASYYY+S T
Sbjct: 1774 LQGVSHRH---LSDHLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1829
Query: 55 ISTYNEHL 32
I ++ L
Sbjct: 1830 IERFSSSL 1837