BLASTX nr result
ID: Cnidium21_contig00047208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047208
(404 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2... 102 7e-38
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti... 99 9e-38
ref|XP_003594881.1| Polygalacturonase QRT3 [Medicago truncatula]... 99 1e-37
ref|XP_002867894.1| hypothetical protein ARALYDRAFT_492866 [Arab... 102 2e-37
ref|NP_193738.1| Polygalacturonase QRT3 [Arabidopsis thaliana] g... 102 3e-37
>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
predicted protein [Populus trichocarpa]
Length = 489
Score = 102 bits (255), Expect(2) = 7e-38
Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Frame = +1
Query: 196 AGRGNLMIHGGTLRASDDFPTDGYLVDLSA--SSSDLEYIYEFVTLRDLMLDSNFRGGAI 369
AG GNLMI GGTL ASDDFPTDGYL+DLSA SSS Y YE++T++DLMLD ++RGG I
Sbjct: 147 AGVGNLMISGGTLTASDDFPTDGYLIDLSASSSSSSSSYNYEYITIKDLMLDCSYRGGGI 206
Query: 370 QVVNSLRTSID 402
V+NSLRTSID
Sbjct: 207 SVINSLRTSID 217
Score = 79.7 bits (195), Expect(2) = 7e-38
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 12 YHVTAYGADPTGETDSTDAILNAIADAVQGPGNGEMMKGIVNLGGVRIDLDGGIYKIS 185
Y VT+YGADPTG+ DST+A+L AI DA GP G +MKGI NLGG I+L GG Y+IS
Sbjct: 82 YEVTSYGADPTGKLDSTEALLKAITDAFNGPSEGFLMKGIANLGGAYINLQGGNYRIS 139
>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
Length = 505
Score = 99.4 bits (246), Expect(2) = 9e-38
Identities = 50/86 (58%), Positives = 62/86 (72%), Gaps = 18/86 (20%)
Frame = +1
Query: 199 GRGNLMIHGGTLRASDDFPTDGYLVDLSASSSDLE------------------YIYEFVT 324
G GN+MIHGGTL+ASD+FP DGYL+DLS+SSS+ + Y YEF++
Sbjct: 151 GAGNIMIHGGTLKASDNFPADGYLIDLSSSSSNQKKENNQTTVADQLISSSSTYNYEFIS 210
Query: 325 LRDLMLDSNFRGGAIQVVNSLRTSID 402
LRDLMLDSN+RGG I V+NSLRT+ID
Sbjct: 211 LRDLMLDSNYRGGGIAVINSLRTTID 236
Score = 82.8 bits (203), Expect(2) = 9e-38
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 6 REYHVTAYGADPTGETDSTDAILNAIADAVQGPGNGEMMKGIVNLGGVRIDLDGGIYKIS 185
R Y VT+YGADPTG DST+AIL A++DA +GP +G +M+GI NLGG RIDL+GG Y IS
Sbjct: 83 RLYLVTSYGADPTGVADSTEAILGALSDAFKGPSDGVLMEGIANLGGARIDLEGGSYLIS 142
>ref|XP_003594881.1| Polygalacturonase QRT3 [Medicago truncatula]
gi|355483929|gb|AES65132.1| Polygalacturonase QRT3
[Medicago truncatula]
Length = 497
Score = 99.0 bits (245), Expect(2) = 1e-37
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 8/77 (10%)
Frame = +1
Query: 196 AGRGNLMIHGGTLRASDDFPTDGYLVDLSASSSDLE--------YIYEFVTLRDLMLDSN 351
+G GNLMIHGGT++AS+DFP DGY++DLS SS++ + Y +E++TL+DL+LDSN
Sbjct: 149 SGVGNLMIHGGTIKASNDFPNDGYIIDLSTSSNENDGKNSPSSSYNFEYITLKDLLLDSN 208
Query: 352 FRGGAIQVVNSLRTSID 402
FRGG I V+NSLRT+ID
Sbjct: 209 FRGGGISVINSLRTNID 225
Score = 82.8 bits (203), Expect(2) = 1e-37
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +3
Query: 6 REYHVTAYGADPTGETDSTDAILNAIADAVQGPGNGEMMKGIVNLGGVRIDLDGGIYKI 182
R YHVT+YGADPTG +DST+A+L AIADA GP G +M+GI NLGG +I+L+GG Y I
Sbjct: 82 RVYHVTSYGADPTGNSDSTEALLAAIADATNGPSEGYLMEGISNLGGAQINLEGGNYMI 140
>ref|XP_002867894.1| hypothetical protein ARALYDRAFT_492866 [Arabidopsis lyrata subsp.
lyrata] gi|297313730|gb|EFH44153.1| hypothetical protein
ARALYDRAFT_492866 [Arabidopsis lyrata subsp. lyrata]
Length = 481
Score = 102 bits (253), Expect(2) = 2e-37
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = +1
Query: 196 AGRGNLMIHGGTLRASDDFPTDGYLVDLSASSSDLEYIYEFVTLRDLMLDSNFRGGAIQV 375
AG GNL+I GGTLRAS+DFP D YL++L SS L+YI+E++TLRDL++D N+RGGAI V
Sbjct: 141 AGVGNLLISGGTLRASNDFPVDRYLIELKDESSKLQYIFEYITLRDLLIDCNYRGGAIAV 200
Query: 376 VNSLRTSID 402
+NSLRTSID
Sbjct: 201 INSLRTSID 209
Score = 79.0 bits (193), Expect(2) = 2e-37
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +3
Query: 6 REYHVTAYGADPTGETDSTDAILNAIADAVQGPGNGEMMKGIVNLGGVRIDLDGGIYKIS 185
R Y V +YGADPTG+ DSTDAIL A+ DA GP +G +M+GI +LGG RIDL GG Y IS
Sbjct: 74 RVYQVISYGADPTGKLDSTDAILKAMEDAFDGPNHGVLMQGINDLGGARIDLQGGSYLIS 133
>ref|NP_193738.1| Polygalacturonase QRT3 [Arabidopsis thaliana]
gi|145333456|ref|NP_001078410.1| Polygalacturonase QRT3
[Arabidopsis thaliana]
gi|75098717|sp|O49432.1|QRT3_ARATH RecName:
Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG
QRT3; AltName: Full=Pectinase QRT3; AltName:
Full=Protein QUARTET 3; Flags: Precursor
gi|2827659|emb|CAA16613.1| putative protein [Arabidopsis
thaliana] gi|7268800|emb|CAB79005.1| putative protein
[Arabidopsis thaliana] gi|34874572|gb|AAQ83299.1| QRT3
[Arabidopsis thaliana] gi|34874596|gb|AAQ83300.1| QRT3
[Arabidopsis thaliana] gi|332658866|gb|AEE84266.1|
Polygalacturonase QRT3 [Arabidopsis thaliana]
gi|332658867|gb|AEE84267.1| Polygalacturonase QRT3
[Arabidopsis thaliana]
Length = 481
Score = 102 bits (255), Expect(2) = 3e-37
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = +1
Query: 196 AGRGNLMIHGGTLRASDDFPTDGYLVDLSASSSDLEYIYEFVTLRDLMLDSNFRGGAIQV 375
AG GNL+I GGTLRAS+DFP D YL++L SS L+YI+E++TLRDL++D N+RGGAI V
Sbjct: 141 AGAGNLLISGGTLRASNDFPVDRYLIELKDESSKLQYIFEYITLRDLLIDCNYRGGAIAV 200
Query: 376 VNSLRTSID 402
+NSLRTSID
Sbjct: 201 INSLRTSID 209
Score = 77.4 bits (189), Expect(2) = 3e-37
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = +3
Query: 6 REYHVTAYGADPTGETDSTDAILNAIADAVQGPGNGEMMKGIVNLGGVRIDLDGGIYKIS 185
R Y V +YGADPTG+ DSTDAIL A+ +A GP +G +M+GI +LGG RIDL GG Y IS
Sbjct: 74 RVYQVISYGADPTGKLDSTDAILKAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLIS 133