BLASTX nr result

ID: Cnidium21_contig00047207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047207
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus c...    63   3e-08
ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus communis]
           gi|223538452|gb|EEF40058.1| hypothetical protein
           RCOM_0603630 [Ricinus communis]
          Length = 1720

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = -2

Query: 284 EDMKKVLSEIDPEGIALNDAMESLSAIICSYNRK---TSILCTILGHCQLRIRHVHLLVE 114
           E+ KK ++  DPEG AL+D +E +  +I + +RK   TS+L  IL HC L++    L V+
Sbjct: 114 EEKKKAVAGFDPEGGALHDVLEKI--LISTPSRKGFTTSLLNLILKHCHLQVFDTKLQVQ 171

Query: 113 CPTSNHSYSCMLEMNDFDIKSGFTVHRCFLRAVI 12
            P  N    C+LE+ +F+ +S +  H C LR  +
Sbjct: 172 VPILNDDLVCLLELKEFNGESEYFEHGCLLRGFL 205


>ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|222853079|gb|EEE90626.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 287 TEDMKKVLSEIDPEGIALNDAMESLSAIICSYNR-KTSILCTILGHCQLRIRHVHLLVEC 111
           +E+ KK ++  DPEG AL++ +E +     S N  KTS+L  +L HC L+I   +L V+ 
Sbjct: 108 SEEKKKAVAGFDPEGSALHNVLERILLNPPSRNWFKTSLLNLLLKHCHLQISDTNLQVQF 167

Query: 110 PTSNHSYSCMLEMNDFDIKSGFTVHRCFLRAVISSL 3
           P  N +   +LE+ DF+ +S  +   C LR V+ ++
Sbjct: 168 PDLNDAVVFLLELKDFNGESEHSDPGCLLRGVVGAV 203


Top