BLASTX nr result

ID: Cnidium21_contig00047199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047199
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   102   2e-20
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    99   5e-19
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    94   2e-17
gb|ABO80475.1| probable reverse transcriptase At2g02650 - , rela...    89   4e-16
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    87   1e-15

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
 Frame = +1

Query: 7   FWHKLWSLKLPGKVTHFIWRVCKGCLPTANALMIKKVMQSNSCPWCWREVETDTHALFNC 186
           FW+K W LK+P KV + +W++C  C+ TA  L ++ V     C WC RE ET  H LF C
Sbjct: 427 FWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGC 486

Query: 187 DFARTVWYMVGLQQVVRQEQQNTAFEVFMRVFEACNRDQCVQVGMLAWAIWSRRNKWVWE 366
             AR  W ++G +     E    ++      F   + D C ++ ++  ++W++RN WVW 
Sbjct: 487 SMARECWDLLGFRFSFPTESPICSW--IQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWN 544

Query: 367 HINGSAYGVKTMAANCLADWKNAQVKHLGNEDPL---------WRKPMAG 489
             + + YGV + A   L     AQ        PL         W KP  G
Sbjct: 545 KQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELG 594


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
 Frame = +1

Query: 10   WHKLWSLKLPGKVTHFIWRVCKGCLPTANALMIKKVMQSNSCPWCWREVETDTHALFNCD 189
            W  LW+LK+P KV  F+WR C+  LPT   L  + V  + +C  C  E E   H  F C 
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476

Query: 190  FARTVWYMVGLQQVVRQEQQ-NTAFEVFM-RVFEACNRDQCVQVGMLAWAIWSRRNKWVW 363
             +R  W  +GL   V+Q+ Q N +F V M  + +  +  Q V    + W+IW +RN  +W
Sbjct: 1477 KSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIW 1536

Query: 364  EHINGSAYGVKTMAANCLADWKNAQVKHLGNEDPLWRKPMAG 489
             +   +   V+    N L  W+NAQ         +WRKP  G
Sbjct: 1537 RNEVMTTAAVRDRGLNLLTGWQNAQ--------DIWRKPDEG 1570


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
 Frame = +1

Query: 10  WHKLWSLKLPGKVTHFIWRVCKGCLPTANALMIKKVMQSNSCPWCWREVETDTHALFNCD 189
           W+ +W LKLP KV +F+WR C+ CLPT   L  K V   + C  C    E   H  F C 
Sbjct: 366 WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 190 FARTVWYMVGL-QQVVRQEQQNTAFEV-FMRVFEACNRDQCVQVGMLAWAIWSRRNKWVW 363
            +   W  +GL   ++     N +F      + +  ++ Q     +  W+IW  RN  VW
Sbjct: 426 KSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVW 485

Query: 364 EHINGSAYGVKTMAANCLADWKNAQ-VKHLGNEDP------LWRKPMAG 489
            +I  +A  +   A + L  W+NAQ ++H   ++P       W KP  G
Sbjct: 486 NNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPG 534


>gb|ABO80475.1| probable reverse transcriptase At2g02650 - , related [Medicago
           truncatula]
          Length = 169

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
 Frame = +1

Query: 10  WHKLWSLKLPGKVTHFIWRVCKGCLPTANALMIKKVMQSNSCPWCWREVETDTHALFNCD 189
           W ++W +    K  + +WR+C+GC+PT   L  + V     CP C   VE D HA   C 
Sbjct: 33  WKRIWKVNSHHKARNLLWRICRGCVPTRLRLQSRHVQCEVICPSCDTVVEDDWHAFVGCT 92

Query: 190 FARTVWYMVGLQQVVRQEQQNTAFEVFMRVFEAC---NRDQCVQVGMLAWAIWSRRNKWV 360
            A   WY  GL  +VRQ +  T   +   VF+ C   +RD   +V  L W IW+ RN  +
Sbjct: 93  VACESWYWAGL-SIVRQSRVGTVSSLADFVFDICRLESRDIAGRVASLLWKIWAARNDTI 151

Query: 361 WE--HINGSAYGVKTMAA 408
           W   H   ++ G  T+ A
Sbjct: 152 WNDAHHRSTSIGRTTLDA 169


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
 Frame = +1

Query: 10  WHKLWSLKLPGKVTHFIWRVCKGCLPTANALMIKKVMQSNSCPWCWREVETDTHALFNCD 189
           W +LW L +  K   F+WR     LP    L+++KV + +SCP C  + ET  H L  CD
Sbjct: 184 WRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCD 243

Query: 190 FARTVWYMVGLQQVVRQEQQNTAFEVFMRVFEACNRDQCVQVGMLAWAIWSRRNKWVWEH 369
                W  V L Q +   Q +   E    VFE  +        +L W++W+  N  VW  
Sbjct: 244 VTTQSWKYVNLYQFL--SQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVWNG 301

Query: 370 INGSAYGVKTMAANCLADWKNAQV--------KHLGNEDPLWRKPMAG 489
              S   V + A++ L  W  A+         +H    D LW+KP  G
Sbjct: 302 KKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAGGDCLWQKPATG 349


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