BLASTX nr result

ID: Cnidium21_contig00047155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047155
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18972.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002300961.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...    67   2e-09
gb|AAD41417.1|AC007727_6 Similar to gb|X82404 chloroplast SecA p...    66   4e-09
ref|NP_001185058.1| preprotein translocase secA-like protein [Ar...    66   4e-09

>emb|CBI18972.3| unnamed protein product [Vitis vinifera]
          Length = 1067

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/119 (43%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
 Frame = +2

Query: 62  FTTMSSLSSQYTVTPILTYIQSHNHLRITQNHSRITFRTRPIS-------SISTRTVRCS 220
           +T M++ +S     P +T  Q               F TRPIS       S+S R  R S
Sbjct: 7   YTAMAAAASAVLNPPFITPEQP-------SRRPNAIFWTRPISYSSSLSLSLSRRQRRLS 59

Query: 221 -----VSVASKKGNTGGVVKNLTDIASSNYWVVKDYNRLVNSVNSLEPAIQRLSDDQVS 382
                V+VAS K N G + KN +D+ S NYWVV+DY RLVNSVN+LEP IQRLSD+Q++
Sbjct: 60  RPGPLVAVASLKENLGRLRKNWSDLTSLNYWVVRDYYRLVNSVNALEPQIQRLSDEQLA 118


>ref|XP_002300961.1| predicted protein [Populus trichocarpa] gi|222842687|gb|EEE80234.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 41/97 (42%), Positives = 52/97 (53%)
 Frame = +2

Query: 92  YTVTPILTYIQSHNHLRITQNHSRITFRTRPISSISTRTVRCSVSVASKKGNTGGVVKNL 271
           Y   PILT   S  H    + H R+  R+    ++S             K N G + K +
Sbjct: 25  YYTKPILTLPFSLTH-SFPRLHRRLVIRSSTAINVSL------------KENLGSLKKRV 71

Query: 272 TDIASSNYWVVKDYNRLVNSVNSLEPAIQRLSDDQVS 382
           TD  S NYW+VKDY RLV SVN+LE  IQ+LSDDQ+S
Sbjct: 72  TDFTSLNYWIVKDYYRLVESVNALESKIQKLSDDQLS 108


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +2

Query: 239 KGNTGGVVKNLTDIASSNYWVVKDYNRLVNSVNSLEPAIQRLSDDQV 379
           K N G + KN +D+ S NYWVV+DY RLVNSVN+LEP IQRLSD+QV
Sbjct: 817 KENLGRLRKNWSDLTSLNYWVVRDYYRLVNSVNALEPQIQRLSDEQV 863


>gb|AAD41417.1|AC007727_6 Similar to gb|X82404 chloroplast SecA protein from Pisum sativum
           [Arabidopsis thaliana]
          Length = 977

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +2

Query: 215 CSVSVASKKGNTGGVVKNLTDIASSNYWVVKDYNRLVNSVNSLEPAIQRLSDDQV 379
           C VS AS  GN G + +N+ D  S NYWVV+DY RLV SVNSLEP IQ LSD+Q+
Sbjct: 55  CVVS-ASLTGNLGRLKRNVQDFTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQL 108


>ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
           gi|332192012|gb|AEE30133.1| preprotein translocase
           secA-like protein [Arabidopsis thaliana]
          Length = 1805

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = +2

Query: 239 KGNTGGVVKNLTDIASSNYWVVKDYNRLVNSVNSLEPAIQRLSDDQV 379
           KGN G + +N+ D  S NYWVV+DY RLV SVNSLEP IQ LSD+QV
Sbjct: 805 KGNLGRLKRNVQDFTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQV 851


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