BLASTX nr result

ID: Cnidium21_contig00047127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047127
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002531306.1| conserved hypothetical protein [Ricinus comm...    78   8e-13
ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263...    77   1e-12
emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]    77   1e-12
ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|222848135|gb|EEE85682.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = +3

Query: 3    GLKLVTDILNHTLDLLCRVDNIGSRLEGSKIDYAKEVILNAELLFRSSVQHDYDVNKGFS 182
            G K  TD+LNH   +L  ++  G RL G+K+ +AKEVILNAELLF  +   + D  K F 
Sbjct: 773  GSKTATDLLNHVSRILQSINLAGGRLTGNKLTHAKEVILNAELLFGKATLCNSDRMKRFL 832

Query: 183  VSRFLTDELETLASVLCTSSSSFAKFNNKR--TALRGFLFDCIIEYTDSRYGHC 338
            V  FL D LETLA  L  + +    F   +    LR FLFDC+IE  DS+Y  C
Sbjct: 833  VGPFLLDGLETLAGALWKNLNCLPGFEESKEGNQLRSFLFDCVIECLDSKYTRC 886


>ref|XP_002531306.1| conserved hypothetical protein [Ricinus communis]
           gi|223529097|gb|EEF31078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 869

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = +3

Query: 3   GLKLVTDILNHTLDLLCRVDNIGSRLEGSKIDYAKEVILNAELLFRSSVQHDYDVNKGFS 182
           G  +VTD+LNH   +L  ++     L G+++ Y +EVILNAELLF S+   + D  K   
Sbjct: 664 GSIMVTDLLNHLSVILQSINLADGGLTGARLTYVREVILNAELLFGSAALQNSDRMKSSF 723

Query: 183 VSRFLTDELETLASVLCTSSSSFAKFNNKR--TALRGFLFDCIIEYTDSRY 329
           +  FL +ELETLA  + T+ +  + F   +  + +R FLFD +IE  DS+Y
Sbjct: 724 IGPFLLNELETLAGTMWTNFNCLSGFEESKEGSEVRRFLFDSVIECLDSKY 774


>ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263470 [Vitis vinifera]
            gi|296087265|emb|CBI33639.3| unnamed protein product
            [Vitis vinifera]
          Length = 1004

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
 Frame = +3

Query: 3    GLKLVTDILNHTLDLLCRVDNIGSRLEGSKIDYAKEVILNAELLFRSSVQHDYDVNKGFS 182
            G + V D++N+   ++  ++  G+RL GSK+ + KEVILNAELLF ++   + D  + F 
Sbjct: 797  GSEAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVILNAELLFGNAALANSDGCRSF- 855

Query: 183  VSRFLTDELETLASVLCTSSSSFAKFNNK---RTALRGFLFDCIIEYTDSRY 329
            +  FL  ELETL     T S  F  F +    R  + GFLFD +IEY D++Y
Sbjct: 856  LGHFLVAELETLTCATWTKSDIFPGFEDNTKGRNQVTGFLFDSVIEYLDTKY 907


>emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]
          Length = 1101

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
 Frame = +3

Query: 3    GLKLVTDILNHTLDLLCRVDNIGSRLEGSKIDYAKEVILNAELLFRSSVQHDYDVNKGFS 182
            G + V D++N+   ++  ++  G+RL GSK+ + KEVILNAELLF ++   + D  + F 
Sbjct: 894  GSEAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVILNAELLFGNAALANSDGCRSF- 952

Query: 183  VSRFLTDELETLASVLCTSSSSFAKFNNK---RTALRGFLFDCIIEYTDSRY 329
            +  FL  ELETL     T S  F  F +    R  + GFLFD +IEY D++Y
Sbjct: 953  LGHFLVAELETLTCATWTKSDIFPGFEDNTKGRNQVTGFLFDSVIEYLDTKY 1004


>ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|222870747|gb|EEF07878.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
 Frame = +3

Query: 3   GLKLVTDILNHTLDLLCRVDNIGSRLEGSKIDYAKEVILNAELLFRSSVQHDYDVNKGFS 182
           G ++ TD+LNH   +L  ++  G  L G+++ +AKEVILN ELLF ++   + D  K F 
Sbjct: 162 GSRIATDLLNHVSRILQSINLAGGGLTGNQLSHAKEVILNTELLFGNATLCNSDRMKRFL 221

Query: 183 VSRFLTDELETLASVLCTSSSSFAKFNNKRTA--LRGFLFDCIIEYTDSRYG-HCF 341
           +   L D  E LA  +  + +    F + +    LR FL DC IE  DS+Y  +C+
Sbjct: 222 IGSLLLDGHEALAGAMWKNLNCLLGFEDSKDGIQLRRFLLDCEIECLDSKYSRYCY 277


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