BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047126
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
gb|AFK45134.1| unknown [Lotus japonicus]                               79   3e-13
ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...    78   6e-13
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...    78   6e-13

>ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 601

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 35/91 (38%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   SSHSPTVAEIELKLQEFQIAKTVKIEDSNGLICTMLKDPKNHQLGFEYYQKAKDLPDFRP 182
           SS++P +  +++     Q     + E+ N  +C + +DPK  +L F+YYQ+ K+ P+FRP
Sbjct: 55  SSNTPIIHVVDVNFDVQQQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKERPEFRP 114

Query: 183 QNTTIKHLVRYLIRSKSWDSIWSLCEDFEKF 275
           +  T+KH++RYL+  KSWDSI S+ +DF+ +
Sbjct: 115 EKPTLKHVIRYLVSLKSWDSILSVSDDFKVY 145


>gb|AFK45134.1| unknown [Lotus japonicus]
          Length = 208

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 32/64 (50%), Positives = 47/64 (73%)
 Frame = +3

Query: 78  EDSNGLICTMLKDPKNHQLGFEYYQKAKDLPDFRPQNTTIKHLVRYLIRSKSWDSIWSLC 257
           E+ N  +C + +DPK  +L F+YYQ+ KD P FRP+ +T+KH++RYL+R K WD I S+ 
Sbjct: 88  ENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVS 147

Query: 258 EDFE 269
           EDF+
Sbjct: 148 EDFK 151


>ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 609

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   SSHSPT---VAEIELKLQEFQIAKTVKIEDSNGLICTMLKDPKNHQLGFEYYQKAKDLPD 173
           SS++PT   V ++       +     + E+ N  +C + +DPK  +L F+YYQ+ K+ P+
Sbjct: 60  SSNTPTIIHVVDVNFAADVQKQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKERPE 119

Query: 174 FRPQNTTIKHLVRYLIRSKSWDSIWSLCEDFEKF 275
           FRP+  T+KH++RYL+  KSW SI S+ EDF+ +
Sbjct: 120 FRPEKPTLKHVIRYLVSLKSWGSILSVSEDFKVY 153


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/89 (39%), Positives = 56/89 (62%)
 Frame = +3

Query: 9   HSPTVAEIELKLQEFQIAKTVKIEDSNGLICTMLKDPKNHQLGFEYYQKAKDLPDFRPQN 188
           H   V E++++L +     T K E+ N  +C + +DP++ +L F+YYQK K+ P+FRP  
Sbjct: 63  HHLPVIELDVELPDL----TPKDENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDK 118

Query: 189 TTIKHLVRYLIRSKSWDSIWSLCEDFEKF 275
            T++ ++RYLIRSK W     + EDF+ F
Sbjct: 119 ETLERIIRYLIRSKKWGLSLLVFEDFKSF 147


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/89 (39%), Positives = 56/89 (62%)
 Frame = +3

Query: 9   HSPTVAEIELKLQEFQIAKTVKIEDSNGLICTMLKDPKNHQLGFEYYQKAKDLPDFRPQN 188
           H   V E++++L +     T K E+ N  +C + +DP++ +L F+YYQK K+ P+FRP  
Sbjct: 62  HHLPVIELDVELPDL----TPKDENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDK 117

Query: 189 TTIKHLVRYLIRSKSWDSIWSLCEDFEKF 275
            T++ ++RYLIRSK W     + EDF+ F
Sbjct: 118 ETLERIIRYLIRSKKWGLSLLVFEDFKSF 146