BLASTX nr result

ID: Cnidium21_contig00047103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047103
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811...   142   3e-32
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...   129   2e-28
ref|NP_189132.2| Helicase/SANT-associated, DNA binding protein [...   127   7e-28
dbj|BAB02897.1| unnamed protein product [Arabidopsis thaliana]        127   7e-28
ref|NP_189131.5| Helicase/SANT-associated, DNA binding protein [...   127   7e-28

>ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811365 [Glycine max]
          Length = 1979

 Score =  142 bits (358), Expect = 3e-32
 Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = -1

Query: 396 GYTLGFGHLVNADVGSMG-VVDHKGGVPTDLPPQLTVIKETTSELKQRFFSYEEAKRQLE 220
           GY  G   LVNA+V SMG VVD   G+   + P+   I++  +EL++ +   EE +R+LE
Sbjct: 3   GYKSGSALLVNAEVDSMGGVVDGGIGIGLKISPRRAAIEKAQAELREEYDVREERRRELE 62

Query: 219 FLEEGGDPLDFRAGNASSISVQSTSLMDQKHDQFGTSEAKDRLAVAASPPGDSVDSSGRP 40
           FLE+GG+PLDF++GNA+S+SVQSTSL DQ H+QF TSEAK   A+ ASP GDSVDSS RP
Sbjct: 63  FLEKGGNPLDFKSGNAASVSVQSTSLTDQLHEQFVTSEAKGSFALTASPHGDSVDSSARP 122

Query: 39  KAPLGNEPNCDDN 1
            APL +EPN  DN
Sbjct: 123 GAPLASEPNTADN 135


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
           gi|223539654|gb|EEF41236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2009

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/133 (54%), Positives = 90/133 (67%), Gaps = 1/133 (0%)
 Frame = -1

Query: 396 GYTLGFGHLVNADVGSMG-VVDHKGGVPTDLPPQLTVIKETTSELKQRFFSYEEAKRQLE 220
           G  LG   LVNA+V SMG VVD   G+     P+   I+   +EL+Q +   EE +R+LE
Sbjct: 3   GCGLGSALLVNAEVDSMGGVVDGGVGIGIKTSPRRAAIERAQAELRQEYDVREERRRELE 62

Query: 219 FLEEGGDPLDFRAGNASSISVQSTSLMDQKHDQFGTSEAKDRLAVAASPPGDSVDSSGRP 40
           FLE+GG+PLDF+ GNA+S+SVQSTSL D + + F TSEAK   A+ ASP GDSV+SSGRP
Sbjct: 63  FLEKGGNPLDFKFGNAASVSVQSTSLTDHQTEHFVTSEAKGSFALTASPHGDSVESSGRP 122

Query: 39  KAPLGNEPNCDDN 1
            AP   EPN  DN
Sbjct: 123 GAPTVCEPNSADN 135


>ref|NP_189132.2| Helicase/SANT-associated, DNA binding protein [Arabidopsis
           thaliana] gi|332643436|gb|AEE76957.1|
           Helicase/SANT-associated, DNA binding protein
           [Arabidopsis thaliana]
          Length = 1957

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = -1

Query: 372 LVNADVGSMG-VVDHKGGVPTDLPPQLTVIKETTSELKQRFFSYEEAKRQLEFLEEGGDP 196
           LVNA+V SMG V+D  GG+     P+ T I++  +EL+Q +   EE +R+LEFLE+GG+P
Sbjct: 10  LVNAEVDSMGGVIDSGGGIGVKTSPRRTAIEKAQAELRQEYDVREERRRELEFLEKGGNP 69

Query: 195 LDFRAGNASSISVQSTSLMDQKHDQFGTSEAKDRLAVAASPPGDSVDSSGRPKAPLGNEP 16
           LDF+ G A+S SVQSTSL DQ+ + F  SE KD  A+ ASP GDSV+SSGRP  P  +EP
Sbjct: 70  LDFKFGIATSHSVQSTSLTDQQAEHFVNSEVKDSFALTASPHGDSVESSGRPGVPTISEP 129

Query: 15  NCDDN 1
           N  DN
Sbjct: 130 NTADN 134


>dbj|BAB02897.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1836

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = -1

Query: 372 LVNADVGSMG-VVDHKGGVPTDLPPQLTVIKETTSELKQRFFSYEEAKRQLEFLEEGGDP 196
           LVNA+V SMG V+D  GG+     P+ T I++  +EL+Q +   EE +R+LEFLE+GG+P
Sbjct: 10  LVNAEVDSMGGVIDSGGGIGVKTSPRRTAIEKAQAELRQEYDVREERRRELEFLEKGGNP 69

Query: 195 LDFRAGNASSISVQSTSLMDQKHDQFGTSEAKDRLAVAASPPGDSVDSSGRPKAPLGNEP 16
           LDF+ G A+S SVQSTSL DQ+ + F  SE KD  A+ ASP GDSV+SSGRP  P  +EP
Sbjct: 70  LDFKFGIATSHSVQSTSLTDQQAEHFVNSEVKDSFALTASPHGDSVESSGRPGVPTISEP 129

Query: 15  NCDDN 1
           N  DN
Sbjct: 130 NTADN 134


>ref|NP_189131.5| Helicase/SANT-associated, DNA binding protein [Arabidopsis
           thaliana] gi|332643434|gb|AEE76955.1|
           Helicase/SANT-associated, DNA binding protein
           [Arabidopsis thaliana]
          Length = 1907

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = -1

Query: 372 LVNADVGSMG-VVDHKGGVPTDLPPQLTVIKETTSELKQRFFSYEEAKRQLEFLEEGGDP 196
           LVNA+V SMG V+D  GG+     P+ T I++  +EL+Q +   EE +R+LEFLE+GG+P
Sbjct: 10  LVNAEVDSMGGVIDSGGGIGVKTSPRRTAIEKAQAELRQEYDVREERRRELEFLEKGGNP 69

Query: 195 LDFRAGNASSISVQSTSLMDQKHDQFGTSEAKDRLAVAASPPGDSVDSSGRPKAPLGNEP 16
           LDF+ G A+S SVQSTSL DQ+ + F  SE KD  A+ ASP GDSV+SSGRP  P  +EP
Sbjct: 70  LDFKFGIATSHSVQSTSLTDQQAEHFVNSEVKDSFALTASPHGDSVESSGRPGVPTISEP 129

Query: 15  NCDDN 1
           N  DN
Sbjct: 130 NTADN 134


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