BLASTX nr result
ID: Cnidium21_contig00047081
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047081 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc... 122 4e-26 ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2... 120 2e-25 gb|AFL69960.1| polygalacturonase [Brassica napus] 119 3e-25 ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 >ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max] Length = 472 Score = 122 bits (305), Expect = 4e-26 Identities = 63/97 (64%), Positives = 72/97 (74%) Frame = -2 Query: 291 GVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGNDA 112 GV+IVDNMFSGS +GV IVQLD+ N F IDQV+VDRN ARGM +KATVA + GN Sbjct: 348 GVDIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIARGMKLKATVAKMSMQGN-- 405 Query: 111 DDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1 TSW+VD N LLFPN IK+V YSL + G TFPNHA Sbjct: 406 -GTSWSVDFNNVLLFPNLIKNVQYSLSSSGSTFPNHA 441 >ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1| predicted protein [Populus trichocarpa] Length = 489 Score = 120 bits (300), Expect = 2e-25 Identities = 60/99 (60%), Positives = 71/99 (71%) Frame = -2 Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118 A+G+NIVDNMFSGS KG+ IVQLD+ F IDQVVVDRNN GMN+KATVA G+ GN Sbjct: 363 AKGINIVDNMFSGSNKGIEIVQLDQSKGPFKQIDQVVVDRNNVNGMNLKATVAKGSVQGN 422 Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1 TSWT+D + LLFPN I V YS+ + G FP+HA Sbjct: 423 ---GTSWTIDFSPVLLFPNLIDHVQYSVSSSGTLFPSHA 458 >gb|AFL69960.1| polygalacturonase [Brassica napus] Length = 475 Score = 119 bits (297), Expect = 3e-25 Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 1/99 (1%) Frame = -2 Query: 294 RGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGND 115 RGVNIVDNMFSGS GV IVQLD+ N+ F ++DQVVVDRNN GM ++TVA + +GN Sbjct: 353 RGVNIVDNMFSGSDNGVQIVQLDQTNKAFENVDQVVVDRNNVNGMATRSTVAKASVDGN- 411 Query: 114 ADDTSWTVDLNQALLFPNRIKSVHYSLIA-GGDTFPNHA 1 TSWTVD NQ LLFPN IK V Y+L+A G+ FP HA Sbjct: 412 --GTSWTVDFNQVLLFPNLIKHVQYTLVARDGNAFPIHA 448 >ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1| predicted protein [Populus trichocarpa] Length = 336 Score = 119 bits (297), Expect = 3e-25 Identities = 60/99 (60%), Positives = 70/99 (70%) Frame = -2 Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118 A+G+NIVDNMF+GS KG+ IVQLD+ F IDQVVVDRNN GMN+KAT A G+ GN Sbjct: 210 AKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGN 269 Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1 TSWTVD + LLFPN I V YSL + G FP+HA Sbjct: 270 ---GTSWTVDFSPVLLFPNLINHVQYSLSSSGTKFPSHA 305 >ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|224137804|ref|XP_002326444.1| predicted protein [Populus trichocarpa] gi|222832896|gb|EEE71373.1| predicted protein [Populus trichocarpa] gi|222833766|gb|EEE72243.1| predicted protein [Populus trichocarpa] Length = 496 Score = 119 bits (297), Expect = 3e-25 Identities = 60/99 (60%), Positives = 70/99 (70%) Frame = -2 Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118 A+G+NIVDNMF+GS KG+ IVQLD+ F IDQVVVDRNN GMN+KAT A G+ GN Sbjct: 370 AKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGN 429 Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1 TSWTVD + LLFPN I V YSL + G FP+HA Sbjct: 430 ---GTSWTVDFSPVLLFPNLINHVQYSLSSSGTKFPSHA 465