BLASTX nr result

ID: Cnidium21_contig00047081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047081
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc...   122   4e-26
ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
gb|AFL69960.1| polygalacturonase [Brassica napus]                     119   3e-25
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max]
          Length = 472

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/97 (64%), Positives = 72/97 (74%)
 Frame = -2

Query: 291 GVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGNDA 112
           GV+IVDNMFSGS +GV IVQLD+ N  F  IDQV+VDRN ARGM +KATVA  +  GN  
Sbjct: 348 GVDIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIARGMKLKATVAKMSMQGN-- 405

Query: 111 DDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1
             TSW+VD N  LLFPN IK+V YSL + G TFPNHA
Sbjct: 406 -GTSWSVDFNNVLLFPNLIKNVQYSLSSSGSTFPNHA 441


>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/99 (60%), Positives = 71/99 (71%)
 Frame = -2

Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118
           A+G+NIVDNMFSGS KG+ IVQLD+    F  IDQVVVDRNN  GMN+KATVA G+  GN
Sbjct: 363 AKGINIVDNMFSGSNKGIEIVQLDQSKGPFKQIDQVVVDRNNVNGMNLKATVAKGSVQGN 422

Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1
               TSWT+D +  LLFPN I  V YS+ + G  FP+HA
Sbjct: 423 ---GTSWTIDFSPVLLFPNLIDHVQYSVSSSGTLFPSHA 458


>gb|AFL69960.1| polygalacturonase [Brassica napus]
          Length = 475

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 294 RGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGND 115
           RGVNIVDNMFSGS  GV IVQLD+ N+ F ++DQVVVDRNN  GM  ++TVA  + +GN 
Sbjct: 353 RGVNIVDNMFSGSDNGVQIVQLDQTNKAFENVDQVVVDRNNVNGMATRSTVAKASVDGN- 411

Query: 114 ADDTSWTVDLNQALLFPNRIKSVHYSLIA-GGDTFPNHA 1
              TSWTVD NQ LLFPN IK V Y+L+A  G+ FP HA
Sbjct: 412 --GTSWTVDFNQVLLFPNLIKHVQYTLVARDGNAFPIHA 448


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/99 (60%), Positives = 70/99 (70%)
 Frame = -2

Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118
           A+G+NIVDNMF+GS KG+ IVQLD+    F  IDQVVVDRNN  GMN+KAT A G+  GN
Sbjct: 210 AKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGN 269

Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1
               TSWTVD +  LLFPN I  V YSL + G  FP+HA
Sbjct: 270 ---GTSWTVDFSPVLLFPNLINHVQYSLSSSGTKFPSHA 305


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/99 (60%), Positives = 70/99 (70%)
 Frame = -2

Query: 297 ARGVNIVDNMFSGSGKGVNIVQLDERNRNFNDIDQVVVDRNNARGMNVKATVAIGTNNGN 118
           A+G+NIVDNMF+GS KG+ IVQLD+    F  IDQVVVDRNN  GMN+KAT A G+  GN
Sbjct: 370 AKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMNLKATAARGSAQGN 429

Query: 117 DADDTSWTVDLNQALLFPNRIKSVHYSLIAGGDTFPNHA 1
               TSWTVD +  LLFPN I  V YSL + G  FP+HA
Sbjct: 430 ---GTSWTVDFSPVLLFPNLINHVQYSLSSSGTKFPSHA 465


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