BLASTX nr result

ID: Cnidium21_contig00047073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047073
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974552.1| SNARE associated Golgi protein [Arabidopsis tha...    67   2e-09
ref|NP_567450.1| SNARE associated Golgi protein [Arabidopsis tha...    67   2e-09
ref|XP_003610704.1| Transmembrane protein [Medicago truncatula] ...    66   3e-09
gb|AAL24087.1| unknown protein [Arabidopsis thaliana]                  66   3e-09
ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis...    65   4e-09

>ref|NP_974552.1| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|332658127|gb|AEE83527.1| SNARE associated Golgi
           protein [Arabidopsis thaliana]
          Length = 406

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   PAPVTTNNKVNSWDFSFASIWNTVVWMMLINFLVKIVTSTA 124
           P+PV ++ KV  WDFSFASIWN +VW+ML+NF VKIVT+TA
Sbjct: 347 PSPVPSHIKVKKWDFSFASIWNGIVWLMLLNFFVKIVTATA 387


>ref|NP_567450.1| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|53749170|gb|AAU90070.1| At4g14950 [Arabidopsis
           thaliana] gi|332658128|gb|AEE83528.1| SNARE associated
           Golgi protein [Arabidopsis thaliana]
          Length = 416

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   PAPVTTNNKVNSWDFSFASIWNTVVWMMLINFLVKIVTSTA 124
           P+PV ++ KV  WDFSFASIWN +VW+ML+NF VKIVT+TA
Sbjct: 357 PSPVPSHIKVKKWDFSFASIWNGIVWLMLLNFFVKIVTATA 397


>ref|XP_003610704.1| Transmembrane protein [Medicago truncatula]
           gi|217074688|gb|ACJ85704.1| unknown [Medicago
           truncatula] gi|355512039|gb|AES93662.1| Transmembrane
           protein [Medicago truncatula]
           gi|388502006|gb|AFK39069.1| unknown [Medicago
           truncatula]
          Length = 417

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +2

Query: 2   PAPVTTNNKVNSWDFSFASIWNTVVWMMLINFLVKIVTSTA 124
           P PV+ N K   WDFSF SIWNTVVW+ML+NF +KIV STA
Sbjct: 353 PHPVSPNTKGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTA 393


>gb|AAL24087.1| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   PAPVTTNNKVNSWDFSFASIWNTVVWMMLINFLVKIVTSTA 124
           P+PV ++ KV  WDFSFASIWN +VW+ML+NF VKIVT+TA
Sbjct: 357 PSPVPSHIKVKKWDFSFASIWNGMVWLMLLNFFVKIVTATA 397


>ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera]
           gi|297737027|emb|CBI26228.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 8   PVTTNNKVNSWDFSFASIWNTVVWMMLINFLVKIVTSTA 124
           PV +N KV  WD SFASIWNTVVW+MLINF  KIVT+TA
Sbjct: 368 PVPSNMKVKKWDLSFASIWNTVVWLMLINFFFKIVTATA 406


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