BLASTX nr result

ID: Cnidium21_contig00047066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047066
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   105   5e-21
ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin...   105   5e-21
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici...   105   5e-21
ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 46-like [Cucumis sativus]
          Length = 675

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
 Frame = -1

Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136
           MD  EAT+ V ++I+ L+PEN SKI+G+LL++DLG+KE+IRLAFGPE  L SLI + K  
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 135 M-----AHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI--SPSS 1
           +     + SS  SS SP  PI+ P+  N F QSSPRI  PNNGF +  +PSS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRI--PNNGFDLTKNPSS 110


>ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
           [Cucumis sativus]
          Length = 675

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
 Frame = -1

Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136
           MD  EAT+ V ++I+ L+PEN SKI+G+LL++DLG+KE+IRLAFGPE  L SLI + K  
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 135 M-----AHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI--SPSS 1
           +     + SS  SS SP  PI+ P+  N F QSSPRI  PNNGF +  +PSS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRI--PNNGFDLTKNPSS 110


>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223547433|gb|EEF48928.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score =  105 bits (261), Expect = 5e-21
 Identities = 66/113 (58%), Positives = 75/113 (66%), Gaps = 8/113 (7%)
 Frame = -1

Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136
           MD+ EAT  V SRIQ LDPEN SKI+G LLL+D G+KEMIRLAFGPE  L +LI Q KT 
Sbjct: 1   MDSYEATKMVFSRIQSLDPENASKIMGCLLLQDHGDKEMIRLAFGPETLLHNLILQAKTH 60

Query: 135 MAHSSNT-------SSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI-SPSS 1
           +  SSNT       SS SPF P S  +RP+    SS RI   NNGF I +PSS
Sbjct: 61  LGFSSNTPSTPSTPSSPSPFNPTS--SRPSSLSISSSRITSNNNGFDITNPSS 111


>ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|222845550|gb|EEE83097.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
 Frame = -1

Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136
           MD+ EA + V SRIQ L+PEN SKI+GYLLL+D GEKEMIR AFGPE  L +LI   KT+
Sbjct: 1   MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60

Query: 135 MAHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI-SPSS 1
           +   SN +S+SPFIP S P+ P   P S    I  NNGF I +PSS
Sbjct: 61  LGFLSNKTSSSPFIPSSRPS-PLSIPSSR---ITNNNGFDITNPSS 102


>ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|222849760|gb|EEE87307.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  102 bits (253), Expect = 4e-20
 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = -1

Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136
           MD+ EAT+ V SRIQ L+PEN SKI+GYLLL+D GEKEMIRLAFGPE  L +LI Q KT+
Sbjct: 1   MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60

Query: 135 MAHSSNT-SSASP-FIPISNPNRPNLFPQSSPRIIVPNNGFHISPSS 1
           +   SNT S+ SP FIP S P+   L+  SS   I  NNGF I+ SS
Sbjct: 61  LGFPSNTPSTPSPAFIPSSRPS--PLYISSSR--IPNNNGFDITNSS 103


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