BLASTX nr result
ID: Cnidium21_contig00047066
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047066 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 105 5e-21 ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin... 105 5e-21 ref|XP_002513525.1| nucleic acid binding protein, putative [Rici... 105 5e-21 ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|2... 104 6e-21 ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 >ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 46-like [Cucumis sativus] Length = 675 Score = 105 bits (261), Expect = 5e-21 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 7/112 (6%) Frame = -1 Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136 MD EAT+ V ++I+ L+PEN SKI+G+LL++DLG+KE+IRLAFGPE L SLI + K Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60 Query: 135 M-----AHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI--SPSS 1 + + SS SS SP PI+ P+ N F QSSPRI PNNGF + +PSS Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRI--PNNGFDLTKNPSS 110 >ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like [Cucumis sativus] Length = 675 Score = 105 bits (261), Expect = 5e-21 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 7/112 (6%) Frame = -1 Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136 MD EAT+ V ++I+ L+PEN SKI+G+LL++DLG+KE+IRLAFGPE L SLI + K Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60 Query: 135 M-----AHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI--SPSS 1 + + SS SS SP PI+ P+ N F QSSPRI PNNGF + +PSS Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRI--PNNGFDLTKNPSS 110 >ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis] gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis] Length = 700 Score = 105 bits (261), Expect = 5e-21 Identities = 66/113 (58%), Positives = 75/113 (66%), Gaps = 8/113 (7%) Frame = -1 Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136 MD+ EAT V SRIQ LDPEN SKI+G LLL+D G+KEMIRLAFGPE L +LI Q KT Sbjct: 1 MDSYEATKMVFSRIQSLDPENASKIMGCLLLQDHGDKEMIRLAFGPETLLHNLILQAKTH 60 Query: 135 MAHSSNT-------SSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI-SPSS 1 + SSNT SS SPF P S +RP+ SS RI NNGF I +PSS Sbjct: 61 LGFSSNTPSTPSTPSSPSPFNPTS--SRPSSLSISSSRITSNNNGFDITNPSS 111 >ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa] Length = 428 Score = 104 bits (260), Expect = 6e-21 Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 1/106 (0%) Frame = -1 Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136 MD+ EA + V SRIQ L+PEN SKI+GYLLL+D GEKEMIR AFGPE L +LI KT+ Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60 Query: 135 MAHSSNTSSASPFIPISNPNRPNLFPQSSPRIIVPNNGFHI-SPSS 1 + SN +S+SPFIP S P+ P P S I NNGF I +PSS Sbjct: 61 LGFLSNKTSSSPFIPSSRPS-PLSIPSSR---ITNNNGFDITNPSS 102 >ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa] Length = 685 Score = 102 bits (253), Expect = 4e-20 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Frame = -1 Query: 315 MDNNEATSTVLSRIQKLDPENGSKILGYLLLKDLGEKEMIRLAFGPENHLISLINQVKTE 136 MD+ EAT+ V SRIQ L+PEN SKI+GYLLL+D GEKEMIRLAFGPE L +LI Q KT+ Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60 Query: 135 MAHSSNT-SSASP-FIPISNPNRPNLFPQSSPRIIVPNNGFHISPSS 1 + SNT S+ SP FIP S P+ L+ SS I NNGF I+ SS Sbjct: 61 LGFPSNTPSTPSPAFIPSSRPS--PLYISSSR--IPNNNGFDITNSS 103