BLASTX nr result
ID: Cnidium21_contig00047049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047049
(296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|2... 147 9e-34
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,... 143 2e-32
ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containi... 142 3e-32
ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi... 141 5e-32
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera] 141 5e-32
>ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|222857749|gb|EEE95296.1|
predicted protein [Populus trichocarpa]
Length = 810
Score = 147 bits (371), Expect = 9e-34
Identities = 67/97 (69%), Positives = 86/97 (88%)
Frame = +2
Query: 5 AGFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEE 184
AGFKPQC TFS+++ Y+RLG+LSDAV +YQEM++AGVKPNEVV+GS+I+GFAE+G +EE
Sbjct: 406 AGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEE 465
Query: 185 ALHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGAK 295
AL YF +MEESG+ ANQIVLTS++K YSK+G +GAK
Sbjct: 466 ALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAK 502
>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1029
Score = 143 bits (360), Expect = 2e-32
Identities = 65/98 (66%), Positives = 83/98 (84%)
Frame = +2
Query: 2 GAGFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIE 181
G GFKPQC TFSS+I Y+RLG+LSDA +YQEM++ GVKPNEVV+G+II+G+AE G ++
Sbjct: 615 GVGFKPQCATFSSIIACYARLGQLSDAAGVYQEMVKVGVKPNEVVYGAIINGYAEEGNVK 674
Query: 182 EALHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGAK 295
EAL YFH+MEE G+SANQIVLTS++K YSK+G + AK
Sbjct: 675 EALKYFHMMEEYGISANQIVLTSLIKVYSKLGCFDSAK 712
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +2
Query: 14 KPQCT-TFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEAL 190
KP+ T T+++LI Y + GRL DA I+ +M+++GV + + F ++I G + EA
Sbjct: 338 KPRLTSTYNTLIDLYGKAGRLGDAADIFSDMMKSGVAMDTITFNTMIYTCGSHGHLSEAE 397
Query: 191 HYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGA 292
+ ME+ GVS + + Y+ G+++ A
Sbjct: 398 TLLNKMEDRGVSPDTRTYNIFLSLYADEGNIDAA 431
>ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 142 bits (358), Expect = 3e-32
Identities = 65/96 (67%), Positives = 86/96 (89%)
Frame = +2
Query: 8 GFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEA 187
GFKP C TFS++IG Y+RLG+LSDAVS+++EM+ GVKPNEVV+GS+I+GFAE G +EEA
Sbjct: 546 GFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFAEHGSLEEA 605
Query: 188 LHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGAK 295
L YFH+MEESG+S+N +VLTS++K+Y KVG++EGAK
Sbjct: 606 LKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAK 641
>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 141 bits (356), Expect = 5e-32
Identities = 66/96 (68%), Positives = 82/96 (85%)
Frame = +2
Query: 8 GFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEA 187
GFKPQC TFS++I Y+RLGRL DAV +Y+EM+ GVKPNEVV+GS+I+GF+E G +EEA
Sbjct: 619 GFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 678
Query: 188 LHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGAK 295
L YF M+E G+SANQIVLTS++KAYSKVG +EGAK
Sbjct: 679 LCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAK 714
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Frame = +2
Query: 8 GFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEA 187
G P +T++SLI +S + +A I EM + G KP + F ++I +A +G + +A
Sbjct: 584 GTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDA 643
Query: 188 LHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGA 292
+ + M GV N++V S++ +S+ G+VE A
Sbjct: 644 VGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 678
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 GAGFKPQCT-TFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEI 178
G+ KP+ T T+++LI Y + GRL DA ++ EML+ GV + + F ++I G +
Sbjct: 337 GSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHL 396
Query: 179 EEALHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGA 292
EA MEE G+S + + Y+ G+++ A
Sbjct: 397 SEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAA 434
>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 141 bits (356), Expect = 5e-32
Identities = 66/96 (68%), Positives = 82/96 (85%)
Frame = +2
Query: 8 GFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEA 187
GFKPQC TFS++I Y+RLGRL DAV +Y+EM+ GVKPNEVV+GS+I+GF+E G +EEA
Sbjct: 924 GFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 983
Query: 188 LHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGAK 295
L YF M+E G+SANQIVLTS++KAYSKVG +EGAK
Sbjct: 984 LCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAK 1019
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Frame = +2
Query: 8 GFKPQCTTFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEIEEA 187
G P +T++SLI +S + +A I EM + G KP + F ++I +A +G + +A
Sbjct: 889 GTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDA 948
Query: 188 LHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGA 292
+ + M GV N++V S++ +S+ G+VE A
Sbjct: 949 VGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 983
Score = 56.6 bits (135), Expect = 2e-06
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 GAGFKPQCT-TFSSLIGSYSRLGRLSDAVSIYQEMLEAGVKPNEVVFGSIIDGFAEIGEI 178
G+ KP+ T T+++LI Y + GRL DA ++ EML+ GV + + F ++I G +
Sbjct: 642 GSRHKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHL 701
Query: 179 EEALHYFHVMEESGVSANQIVLTSMVKAYSKVGSVEGA 292
EA MEE G+S + + Y+ G+++ A
Sbjct: 702 SEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAA 739