BLASTX nr result

ID: Cnidium21_contig00047038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047038
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   143   1e-32
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              143   1e-32
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   135   4e-30
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-25

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/154 (48%), Positives = 100/154 (64%)
 Frame = +3

Query: 3    PNTVADHMKNETKGRKDAEDRKELFHLALVCLKELITSALQCPEQEGIMAELVLQATLEN 182
            P   AD  K E KGRKD EDRKE  HLALVCLKELI   LQ P Q  ++ +LV  +T+E 
Sbjct: 904  PKLEADQKKKEGKGRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLSTVEY 963

Query: 183  GPKDVSNVDLVDECEVNNRTDDQTERNIYMFIQLTIKPIFSELLSASSFQEIEILCDITM 362
              ++V++V   DECE+ + TDDQ  ++  + I+  ++P+FSELL  S  +E+EILCDI M
Sbjct: 964  PLRNVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFVREVEILCDIVM 1023

Query: 363  SIGTKLSGERRRSLGDWVLQICKSCDVKNSKIAK 464
             IG KL  + R   G W ++IC +  + NSK+AK
Sbjct: 1024 MIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAK 1057


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/154 (48%), Positives = 100/154 (64%)
 Frame = +3

Query: 3    PNTVADHMKNETKGRKDAEDRKELFHLALVCLKELITSALQCPEQEGIMAELVLQATLEN 182
            P   AD  K E KGRKD EDRKE  HLALVCLKELI   LQ P Q  ++ +LV  +T+E 
Sbjct: 872  PKLEADQKKKEGKGRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLSTVEY 931

Query: 183  GPKDVSNVDLVDECEVNNRTDDQTERNIYMFIQLTIKPIFSELLSASSFQEIEILCDITM 362
              ++V++V   DECE+ + TDDQ  ++  + I+  ++P+FSELL  S  +E+EILCDI M
Sbjct: 932  PLRNVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFVREVEILCDIVM 991

Query: 363  SIGTKLSGERRRSLGDWVLQICKSCDVKNSKIAK 464
             IG KL  + R   G W ++IC +  + NSK+AK
Sbjct: 992  MIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAK 1025


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  135 bits (340), Expect = 4e-30
 Identities = 74/165 (44%), Positives = 100/165 (60%), Gaps = 11/165 (6%)
 Frame = +3

Query: 3    PNTVADHMKNETKGRKDAEDRKELFHLALVCLKELITSALQCPEQEGIMAELVLQATLEN 182
            P   AD  K E KGRKD EDRKE  HLALVCLKELI   LQ P Q  ++ +LV  +T+E 
Sbjct: 914  PKLEADQKKKEGKGRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLSTVEY 973

Query: 183  GPKDVSNVDLVDECEVNNRTDDQTERNIYMFIQLTIKPIFSELLSASSFQEIE------- 341
              ++V++V   DECE+ + TDDQ  ++  + I+  ++P+FSELL  S  +E+E       
Sbjct: 974  PLRNVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFLREVEQSHLKRF 1033

Query: 342  ----ILCDITMSIGTKLSGERRRSLGDWVLQICKSCDVKNSKIAK 464
                ILCDI M IG KL  + R   G W ++IC +  + NSK+AK
Sbjct: 1034 VSSQILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAK 1078


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score =  122 bits (307), Expect = 3e-26
 Identities = 67/154 (43%), Positives = 94/154 (61%)
 Frame = +3

Query: 3    PNTVADHMKNETKGRKDAEDRKELFHLALVCLKELITSALQCPEQEGIMAELVLQATLEN 182
            P    DH K E KG+ D EDRKE  HLAL+CLKELI  +L+     G++ +L+  +TLE 
Sbjct: 875  PKFATDH-KKEMKGKNDFEDRKEHLHLALLCLKELIAISLKNSNSSGLLEDLLSVSTLE- 932

Query: 183  GPKDVSNVDLVDECEVNNRTDDQTERNIYMFIQLTIKPIFSELLSASSFQEIEILCDITM 362
                    +L +E E  +R DD   R   + I   ++P+F+ELL+ SSF EIEILCDI +
Sbjct: 933  -------YELDEEFEEASRIDDHQIRIKVLLIVKILRPLFAELLAQSSFNEIEILCDIML 985

Query: 363  SIGTKLSGERRRSLGDWVLQICKSCDVKNSKIAK 464
             +G KL  + R S G W + +CKS  ++NSK+A+
Sbjct: 986  MVGDKLPSKWRNSSGSWGINVCKSHGIRNSKVAR 1019


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  111 bits (277), Expect(2) = 5e-25
 Identities = 68/156 (43%), Positives = 94/156 (60%)
 Frame = +3

Query: 12   VADHMKNETKGRKDAEDRKELFHLALVCLKELITSALQCPEQEGIMAELVLQATLENGPK 191
            V D  K E K  KD EDRK   HLAL+C+KEL+T +LQ P   G++ +LV  +TLE    
Sbjct: 929  VTDEKKKE-KRIKD-EDRKGYLHLALLCMKELVTISLQNPHLTGLLEDLVSVSTLEYPEL 986

Query: 192  DVSNVDLVDECEVNNRTDDQTERNIYMFIQLTIKPIFSELLSASSFQEIEILCDITMSIG 371
            D       D+ E  +R DDQ  R   +F+   +KP+FSELL+ S F E+EI+ D+ + IG
Sbjct: 987  D-------DKYEEASRIDDQHIRIKELFVVKVLKPLFSELLAQSYFHELEIISDMLLVIG 1039

Query: 372  TKLSGERRRSLGDWVLQICKSCDVKNSKIAKLFLIL 479
             KL  ++R S G W + +CKS  +KNSK A+  + L
Sbjct: 1040 EKLPRKQRNSHGAWSIHVCKSNVIKNSKAARSVVAL 1075



 Score = 28.1 bits (61), Expect(2) = 5e-25
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 461  QTVFNLVFSLSPSSNDLVVAEDVAEEL 541
            ++V  L  SLS   +DL+VA+D+A+EL
Sbjct: 1070 RSVVALAISLSSPPSDLIVAQDMAKEL 1096


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