BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047029
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70398.1| hypothetical protein VITISV_039104 [Vitis vinifera]    72   4e-11
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    71   1e-10
gb|ABA93980.1| retrotransposon protein, putative, Ty3-gypsy subc...    70   1e-10
gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]      70   1e-10
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                70   1e-10

>emb|CAN70398.1| hypothetical protein VITISV_039104 [Vitis vinifera]
          Length = 796

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/56 (60%), Positives = 41/56 (73%)
 Frame = +3

Query: 195 PMPAQLDGKWRTCVDFVDLNKACFKDSSSMLCIDQLAGATAGHALLCFMDGYSGYN 362
           P+P + DGK R CVDF DLNKA  KD   + CID L  +TAGH++L FMDG+SGYN
Sbjct: 70  PIPKK-DGKVRVCVDFRDLNKASLKDDFPLPCIDMLVDSTAGHSMLSFMDGFSGYN 124


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 213 DGKWRTCVDFVDLNKACFKDSSSMLCIDQLAGATAGHALLCFMDGYSGYN 362
           +GKWR C+DF DLNKAC KDS  +  ID+L  ATAG+ LL FMD +SGYN
Sbjct: 830 NGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYN 879


>gb|ABA93980.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1567

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = +3

Query: 126 IVEEANDSDLEGF--DVLEQPQIGQP-MPAQLDGKWRTCVDFVDLNKACFKDSSSMLCID 296
           I EE N     GF  +VL    +  P M  + +GKWR CVDF DLNKAC KD   +  ID
Sbjct: 670 IREELNKLLKAGFIREVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRID 729

Query: 297 QLAGATAGHALLCFMDGYSGYN 362
           QL  +TAG  LL F+D YSGY+
Sbjct: 730 QLVDSTAGCELLSFLDAYSGYH 751


>gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 986

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +3

Query: 213 DGKWRTCVDFVDLNKACFKDSSSMLCIDQLAGATAGHALLCFMDGYSGYN 362
           +GKWR CVDF DLNKAC KD   +  IDQL  +TAGH L+ F+D YSGY+
Sbjct: 60  NGKWRMCVDFTDLNKACPKDDFPLPRIDQLVDSTAGHELMSFLDAYSGYH 109


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = +3

Query: 198  MPAQLDGKWRTCVDFVDLNKACFKDSSSMLCIDQLAGATAGHALLCFMDGYSGYN 362
            M  + +GKWR CVD+ DLNKAC KDS  +  ID+L    AGH +L F+D YSGYN
Sbjct: 944  MVKKTNGKWRMCVDYTDLNKACPKDSYPLPTIDRLVDGAAGHQILSFLDAYSGYN 998