BLASTX nr result

ID: Cnidium21_contig00047026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047026
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    65   6e-09
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     61   1e-07
gb|ABG37658.1| integrase [Populus trichocarpa]                         60   2e-07

>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/60 (51%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 6   VCEVCGIQGHYGNDCQYNAQNSQNFQMEQANVFQQ--RQQYNPYSNTYNPGWRDHPNFSY 179
           VC+ CGI GH   +C     N      E  N FQ   R Q+NPYSNTYNPG R HPN SY
Sbjct: 270 VCDACGISGHNSQECPALGNNC-----EAVNAFQSQPRNQFNPYSNTYNPGLRQHPNLSY 324


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = +3

Query: 9   CEVCGIQGHYGNDCQYNAQNSQNFQM-EQANVFQQ-RQQYNPYSNTYNPGWRDHPNFSY 179
           CE+CGI GH   +CQ     S +  + E  N      Q+ +P+SNTYNPGWR+HPN SY
Sbjct: 189 CEICGIIGHSAVECQIGNSPSPDAPLSEHVNYMNNFNQKGDPFSNTYNPGWRNHPNLSY 247


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 6   VCEVCGIQGHYGNDCQYNAQNSQNFQMEQANVFQ--QRQQYNPYSNTYNPGWRDHPNFSY 179
           VC++C    H  NDC     + +    EQA+     QR  +NPYS TYNPGWR+HPNFS+
Sbjct: 91  VCQICETNEHSTNDCP-TLPSFKECLHEQAHALNNFQRPNHNPYSQTYNPGWRNHPNFSW 149


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