BLASTX nr result

ID: Cnidium21_contig00047022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047022
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA63540.1| cyclin A-like protein [Nicotiana tabacum]             117   1e-24
ref|NP_001234787.1| cyclin A3 [Solanum lycopersicum] gi|5420278|...   116   2e-24
ref|XP_002527469.1| cyclin A, putative [Ricinus communis] gi|223...   115   3e-24
dbj|BAA20426.1| A-type cyclin [Nicotiana tabacum]                     115   5e-24
emb|CBI22505.3| unnamed protein product [Vitis vinifera]              108   5e-22

>emb|CAA63540.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 371

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/70 (77%), Positives = 64/70 (91%)
 Frame = +2

Query: 239 ELKKCGYSSLIYQYLHSLEIEERRRPLSNYMEKVQKDITVGMREILVDWLVEVAEEYKLV 418
           +L+KC Y+ LIYQ+LHSLE+EERRRPLSNYMEK+Q D+T  MR ILVDWLVEVA+EYKLV
Sbjct: 98  DLQKCAYAPLIYQHLHSLEVEERRRPLSNYMEKIQNDVTPTMRMILVDWLVEVADEYKLV 157

Query: 419 SDTLYLTVSY 448
           SDTLYLTV++
Sbjct: 158 SDTLYLTVTF 167


>ref|NP_001234787.1| cyclin A3 [Solanum lycopersicum] gi|5420278|emb|CAB46643.1| cyclin
           A3 [Solanum lycopersicum]
          Length = 378

 Score =  116 bits (290), Expect = 2e-24
 Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
 Frame = +2

Query: 14  MGNNENCVPANGS----SKKRAFASVNAVNQQ---------VLSPKKRAVLSEISVNTGN 154
           M + EN VPA  +    S KRAF S+   N+            + KKR VL E++ N GN
Sbjct: 1   MVDEENKVPATAAASRGSNKRAFDSIAITNENDPLQISERPYPANKKRVVLGELN-NLGN 59

Query: 155 VDLGFD--DFCXXXXXXXXXXXXXXXXXXGE---------------LKKCGYSSLIYQYL 283
           V +     D                     E               L+KC Y  LIYQ+L
Sbjct: 60  VIVSTQNSDLTETHESKRKIKLRKTRNVVKETVELKTSANSSPKDNLQKCSYGPLIYQHL 119

Query: 284 HSLEIEERRRPLSNYMEKVQKDITVGMREILVDWLVEVAEEYKLVSDTLYLTVSY 448
           HSLE+EERRRPLSNYMEKVQ ++   MR +LVDWLVEV EEYKLVSDTLYL VSY
Sbjct: 120 HSLEVEERRRPLSNYMEKVQNNVIPSMRTVLVDWLVEVTEEYKLVSDTLYLAVSY 174


>ref|XP_002527469.1| cyclin A, putative [Ricinus communis] gi|223533109|gb|EEF34867.1|
           cyclin A, putative [Ricinus communis]
          Length = 387

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/70 (82%), Positives = 62/70 (88%)
 Frame = +2

Query: 239 ELKKCGYSSLIYQYLHSLEIEERRRPLSNYMEKVQKDITVGMREILVDWLVEVAEEYKLV 418
           +LKKC +SS IY YLHSLE+EE RR LSNYM KVQ DI+V MREILVDWLVEVAEEYKLV
Sbjct: 122 DLKKCSFSSSIYGYLHSLEMEENRRCLSNYMTKVQTDISVKMREILVDWLVEVAEEYKLV 181

Query: 419 SDTLYLTVSY 448
           SDTLYLTVSY
Sbjct: 182 SDTLYLTVSY 191


>dbj|BAA20426.1| A-type cyclin [Nicotiana tabacum]
          Length = 371

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = +2

Query: 239 ELKKCGYSSLIYQYLHSLEIEERRRPLSNYMEKVQKDITVGMREILVDWLVEVAEEYKLV 418
           +L+KC Y+ LIYQ+LHSLE+E RRRPLSNYMEKVQ D+T  MR ILVDWLVEVA+EYKLV
Sbjct: 98  DLQKCAYAPLIYQHLHSLEVEARRRPLSNYMEKVQNDVTPTMRMILVDWLVEVADEYKLV 157

Query: 419 SDTLYLTVSY 448
           SDTLYLTV++
Sbjct: 158 SDTLYLTVTF 167


>emb|CBI22505.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/145 (44%), Positives = 84/145 (57%)
 Frame = +2

Query: 14  MGNNENCVPANGSSKKRAFASVNAVNQQVLSPKKRAVLSEISVNTGNVDLGFDDFCXXXX 193
           M   +NCV   G+ +KRA         Q  + KKR VL +I+ +  N  +   D      
Sbjct: 1   MAEQDNCVHTPGAFRKRASDEC----PQSTTTKKRVVLEDITNSPNNELIQNSD------ 50

Query: 194 XXXXXXXXXXXXXXGELKKCGYSSLIYQYLHSLEIEERRRPLSNYMEKVQKDITVGMREI 373
                         G  +  G SS++YQ+LH+LE+EE+RR   +YMEKVQ D+T  MREI
Sbjct: 51  ------RESQKPKRGIRRTGGCSSIMYQHLHALEMEEKRRARPDYMEKVQNDVTPNMREI 104

Query: 374 LVDWLVEVAEEYKLVSDTLYLTVSY 448
           LVDWLVEVAEEYKLVSDTL+L +SY
Sbjct: 105 LVDWLVEVAEEYKLVSDTLFLCISY 129


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