BLASTX nr result

ID: Cnidium21_contig00047019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047019
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32346.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...   169   2e-40
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm...   162   2e-38
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   162   2e-38
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...   161   5e-38

>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/142 (64%), Positives = 107/142 (75%)
 Frame = -1

Query: 427 QRERDPSEGPVPRLDTCLCLLLSITPLXXXXXXXXXXXXXXXXXEHCSTIKKKEKQARGE 248
           QRERDPSEGPVPRLDTCLC+LLSITPL                     T  +KEKQ   +
Sbjct: 442 QRERDPSEGPVPRLDTCLCMLLSITPLAIVNIIEEEESTLIDEAGRSPTNLRKEKQISVK 501

Query: 247 LRNDLVSSVQQLGDYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLSDMPV 68
            R DL+SS+Q LGDYEGLLT P S+S VANQA AKAMMF+SG+T GSGYLD ++++D+P+
Sbjct: 502 HRKDLISSLQLLGDYEGLLTVPQSLSLVANQAVAKAMMFVSGVTSGSGYLDCMSMNDLPM 561

Query: 67  SCAGNMRHLIVEACIARNLLDT 2
           +C+GNMRHLIVEACIARNLLDT
Sbjct: 562 NCSGNMRHLIVEACIARNLLDT 583


>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/142 (61%), Positives = 107/142 (75%)
 Frame = -1

Query: 427 QRERDPSEGPVPRLDTCLCLLLSITPLXXXXXXXXXXXXXXXXXEHCSTIKKKEKQARGE 248
           QRERDPSEGPVPRLDTCLC+LLSITPL                       ++++KQ   +
Sbjct: 391 QRERDPSEGPVPRLDTCLCMLLSITPLAIVNIIE----------------EEEKKQISVK 434

Query: 247 LRNDLVSSVQQLGDYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLSDMPV 68
            R DL+SS+Q LGDYEGLLT P S+S VANQA AKAMMF+SG+T GSGYLD ++++D+P+
Sbjct: 435 HRKDLISSLQLLGDYEGLLTVPQSLSLVANQAVAKAMMFVSGVTSGSGYLDCMSMNDLPM 494

Query: 67  SCAGNMRHLIVEACIARNLLDT 2
           +C+GNMRHLIVEACIARNLLDT
Sbjct: 495 NCSGNMRHLIVEACIARNLLDT 516


>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
           gi|223543877|gb|EEF45403.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1325

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/142 (58%), Positives = 101/142 (71%)
 Frame = -1

Query: 427 QRERDPSEGPVPRLDTCLCLLLSITPLXXXXXXXXXXXXXXXXXEHCSTIKKKEKQARGE 248
           QRERDP EGP+PRLD  LC+LLSI PL                 E  ST   KE + +G+
Sbjct: 381 QRERDPIEGPIPRLDARLCILLSIIPLVVSDLIEEEENAPTEESESGSTNHWKENKFQGK 440

Query: 247 LRNDLVSSVQQLGDYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLSDMPV 68
            RNDLV S+Q LGD++GLL+PP SV S ANQAA KAM+F+SG+T+GS Y + + + DMP+
Sbjct: 441 RRNDLVFSLQLLGDHQGLLSPPQSVVSAANQAATKAMLFVSGITIGSAYFECINMKDMPI 500

Query: 67  SCAGNMRHLIVEACIARNLLDT 2
            C+GNMRHLIVEACIARNLLDT
Sbjct: 501 DCSGNMRHLIVEACIARNLLDT 522


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
           gi|297736973|emb|CBI26174.3| unnamed protein product
           [Vitis vinifera]
          Length = 1305

 Score =  162 bits (411), Expect = 2e-38
 Identities = 85/142 (59%), Positives = 101/142 (71%)
 Frame = -1

Query: 427 QRERDPSEGPVPRLDTCLCLLLSITPLXXXXXXXXXXXXXXXXXEHCSTIKKKEKQARGE 248
           QRERDP EGP+PRLDT LCLLLSIT L                       ++++K   G+
Sbjct: 378 QRERDPIEGPMPRLDTRLCLLLSITTLVVADLIE----------------EEEKKHVPGK 421

Query: 247 LRNDLVSSVQQLGDYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLSDMPV 68
            R DLVSS+Q LGDYEGLLTPP SV S ANQAAAKAMM +SG+ VGS Y + +++ DMP+
Sbjct: 422 CRKDLVSSLQMLGDYEGLLTPPQSVISAANQAAAKAMMLVSGINVGSAYFEFISMKDMPI 481

Query: 67  SCAGNMRHLIVEACIARNLLDT 2
           +C+GNMRHLIVEACIARNLLDT
Sbjct: 482 NCSGNMRHLIVEACIARNLLDT 503


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Cucumis sativus]
          Length = 1335

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/143 (58%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 QRERDPSEGPVPRLDTCLCLLLSITPLXXXXXXXXXXXXXXXXXEHCSTIKKK-EKQARG 251
           QRERDPSEGPVPRLDTCLC+LLSI+ L                   CS  K + EKQ+ G
Sbjct: 391 QRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPKEDD--CSPSKSRDEKQSSG 448

Query: 250 ELRNDLVSSVQQLGDYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLSDMP 71
             R  L++S+Q LG+YE LLTPP S+ +VANQAAAKA+MF+SG+ VG+ Y D  +++D P
Sbjct: 449 MCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNEYYDCASMNDTP 508

Query: 70  VSCAGNMRHLIVEACIARNLLDT 2
           ++C+GNMRHLIVEACI+RNLLDT
Sbjct: 509 INCSGNMRHLIVEACISRNLLDT 531


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