BLASTX nr result

ID: Cnidium21_contig00046977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046977
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535118.1| PREDICTED: uncharacterized protein LOC100785...    76   3e-12
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             75   4e-12
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]    75   6e-12
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]    74   1e-11
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       73   2e-11

>ref|XP_003535118.1| PREDICTED: uncharacterized protein LOC100785221 [Glycine max]
          Length = 462

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
 Frame = -1

Query: 272 YTFADMQN---PLFLHPSDGPLSVSIPKLQGSGDYRSWKRSFEIQLSSKRKLGFVNGTVT 102
           YT  D QN   PL++HP++ P ++    L   G+Y SW R+ ++ L +K KLGFV+GT+ 
Sbjct: 9   YTMQDAQNASNPLYIHPNESPSTILASPLLSDGNYHSWSRAMKMSLLTKNKLGFVDGTIA 68

Query: 101 RSTTSEAEATQWDTCNNLVISWLHNNLSENIKQ 3
               + A    W+  N LV+SWL  ++S  I Q
Sbjct: 69  EPPKNHAVLPFWERGNMLVLSWLIKSMSVEIAQ 101


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -1

Query: 260 DMQNPLFLHPSDGPLSVSIP-KLQGSGDYRSWKRSFEIQLSSKRKLGFVNGTVTRSTTSE 84
           D  +PLF+  SD   +V IP KL GS  Y  W R+  I L  +RK GFV G  TR+   +
Sbjct: 7   DQNDPLFIGNSDSSSAVLIPIKLVGSEKYGIWSRAMRIALLGRRKYGFVTGACTRALYKD 66

Query: 83  AEATQWDTCNNLVISWLHNNLSENI 9
               QW+TCN +V+SWL N +SE +
Sbjct: 67  ELHEQWETCNAIVLSWLMNTVSEEL 91


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = -1

Query: 260 DMQNPLFLHPSDGPLSVSIPKLQGSGDYRSWKRSFEIQLSSKRKLGFVNGTVTRSTTSEA 81
           D  NP FLH SD P  V + K     +Y +W R+  I L++K KLGF++GT T S+ ++ 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMSSATDK 72

Query: 80  --EATQWDTCNNLVISWLHNNLSENI 9
             E   W  CN++++SW+ N+LS+++
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDL 98


>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -1

Query: 260 DMQNPLFLHPSDGP-LSVSIPKLQGSG-DYRSWKRSFEIQLSSKRKLGFVNGTVTRSTTS 87
           D  +P FLH  D P LS+    L GSG +Y SW RS    L++K KLGF++GT++R   +
Sbjct: 17  DHSSPYFLHNGDHPSLSLVSLSLAGSGSNYHSWCRSMVTALNAKNKLGFIDGTISRLAAT 76

Query: 86  EAEATQWDTCNNLVISWLHNNLSENIKQ 3
           +  A  W  CN++VISWL N++ + I +
Sbjct: 77  DLLAGLWSRCNSMVISWLSNSVCKEIAE 104


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -1

Query: 263 ADMQNPLFLHPSDGPLSVSI-PKLQGSGDYRSWKRSFEIQLSSKRKLGFVNGTVTRSTTS 87
           ++  +P ++HPSDGP S+ I PKL GS +Y +W RS +  L +K KL F++G+++     
Sbjct: 9   SNSDSPYYIHPSDGPSSLIITPKLNGS-NYLAWHRSMQRALGAKNKLVFLDGSISVPDID 67

Query: 86  EAEATQWDTCNNLVISWLHNNLSENIKQ 3
           +     W+ CN+L+ SW+ N+++E+I Q
Sbjct: 68  DLNRQAWERCNHLIHSWIVNSVTESIAQ 95


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