BLASTX nr result

ID: Cnidium21_contig00046970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046970
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890162.1| hypothetical protein ARALYDRAFT_471835 [Arab...   124   8e-27
ref|XP_002315082.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|NP_173089.1| organic cation/carnitine transporter 3 [Arabido...   121   5e-26
ref|XP_002265206.1| PREDICTED: solute carrier family 22 member 2...   120   9e-26
ref|NP_178054.1| organic cation/carnitine transporter 2 [Arabido...   116   2e-24

>ref|XP_002890162.1| hypothetical protein ARALYDRAFT_471835 [Arabidopsis lyrata subsp.
           lyrata] gi|297336004|gb|EFH66421.1| hypothetical protein
           ARALYDRAFT_471835 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/116 (50%), Positives = 75/116 (64%), Gaps = 14/116 (12%)
 Frame = -3

Query: 307 NSTTPLVSKAEQYSS-------IEETIEECIGDFGWIQFLHVVLVSFVWTFDSQQTFISI 149
           +ST PL+S +    S       ++ETIE+CIG+FGW QFL   LVSF W FD+QQTFI++
Sbjct: 3   DSTRPLLSDSNSSESNLPPPKSLDETIEQCIGNFGWAQFLQAALVSFAWVFDAQQTFITV 62

Query: 148 FTDAQPTWHC----LPGYSCN---SDICLLPKNSWSWDLPIHASIVSEWSHECDSS 2
           FTD+QPTWHC    L    CN   S++C LP  +WSWD   H SI+SEW  +C  S
Sbjct: 63  FTDSQPTWHCTDSDLVDSVCNTSSSNLCTLPNQTWSWDFNPHVSIISEWGLQCAGS 118


>ref|XP_002315082.1| predicted protein [Populus trichocarpa] gi|222864122|gb|EEF01253.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = -3

Query: 286 SKAEQYSSIEETIEECIGDFGWIQFLHVVLVSFVWTFDSQQTFISIFTDAQPTWHCLPGY 107
           ++++Q  S++ETIE CIG+FG  Q L  +LVSF W FD+QQTFIS+FTDA+P WHC    
Sbjct: 16  NESKQPPSLDETIERCIGEFGLAQLLQAILVSFAWVFDAQQTFISVFTDAEPKWHCTSD- 74

Query: 106 SCN--SDICLLPKNSWSWDLPIHASIVSEWSHECDSS 2
           SC   SDIC LP+NSW+WD P   SI+SEW  EC SS
Sbjct: 75  SCTSVSDICHLPQNSWAWDSPKDTSIISEWGLECASS 111


>ref|NP_173089.1| organic cation/carnitine transporter 3 [Arabidopsis thaliana]
           gi|75265504|sp|Q9SA38.1|OCT3_ARATH RecName: Full=Organic
           cation/carnitine transporter 3; Short=AtOCT3
           gi|4966360|gb|AAD34691.1|AC006341_19 Is a member of the
           PF|00083 sugar transporter family [Arabidopsis thaliana]
           gi|18958009|gb|AAL79578.1| At1g16390/F3O9_19
           [Arabidopsis thaliana] gi|23507793|gb|AAN38700.1|
           At1g16390/F3O9_19 [Arabidopsis thaliana]
           gi|332191324|gb|AEE29445.1| organic cation/carnitine
           transporter 3 [Arabidopsis thaliana]
          Length = 518

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/116 (51%), Positives = 72/116 (62%), Gaps = 14/116 (12%)
 Frame = -3

Query: 307 NSTTPLVSKAEQYSS-------IEETIEECIGDFGWIQFLHVVLVSFVWTFDSQQTFISI 149
           +ST PL+S      S       +EETIE CIGDFGW QFL   LVSF W FD+QQTFI++
Sbjct: 3   DSTRPLLSDFNSSESNLPPPRSLEETIERCIGDFGWAQFLQAALVSFAWFFDAQQTFITV 62

Query: 148 FTDAQPTWHC----LPGYSCN---SDICLLPKNSWSWDLPIHASIVSEWSHECDSS 2
           FTD+QP WHC         CN   S++C LP  +WSWDL  H SI+SEW  +C  S
Sbjct: 63  FTDSQPMWHCDNSDRVDSVCNTSSSNLCTLPNQTWSWDLNPHVSIISEWGLQCAGS 118


>ref|XP_002265206.1| PREDICTED: solute carrier family 22 member 21-like [Vitis vinifera]
          Length = 526

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
 Frame = -3

Query: 304 STTPLVSKAEQYSSIEETIEECIGDFGWIQFLHVVLVSFVWTFDSQQTFISIFTDAQPTW 125
           S TP V K     S++E IE+ IG F W Q LH +LVS  W FD QQTFISIFTDA+PTW
Sbjct: 25  SETPSVEKV--LPSLDEFIEQSIGGFAWAQLLHAILVSLAWLFDGQQTFISIFTDAEPTW 82

Query: 124 HC--LPGYSCN--SDICLLPKNSWSWDLPIHASIVSEWSHECDSS 2
           HC  L    CN  S+ICLLPK +W WD P +   +SEWS EC +S
Sbjct: 83  HCNHLSTEDCNSGSNICLLPKTAWEWDKPAYTFFISEWSLECVNS 127


>ref|NP_178054.1| organic cation/carnitine transporter 2 [Arabidopsis thaliana]
           gi|75219810|sp|O64515.1|OCT2_ARATH RecName: Full=Organic
           cation/carnitine transporter 2; Short=AtOCT2
           gi|3152576|gb|AAC17057.1| Similar to liver-specific
           transport protein gb|L27651 from Rattus norviegicus
           [Arabidopsis thaliana] gi|332198113|gb|AEE36234.1|
           organic cation/carnitine transporter 2 [Arabidopsis
           thaliana]
          Length = 527

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/106 (51%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
 Frame = -3

Query: 301 TTPLVSKAEQYS--SIEETIEECIGDFGWIQFLHVVLVSFVWTFDSQQTFISIFTDAQPT 128
           T PL++ +   S  S+++TIE  IG FGW QFL   LVSF   FD+QQTFIS+FTD++PT
Sbjct: 5   TQPLLTDSNSSSPRSLDDTIESYIGSFGWAQFLQAALVSFSGVFDAQQTFISVFTDSEPT 64

Query: 127 WHCLPGYS-CN---SDICLLPKNSWSWDLPIHASIVSEWSHECDSS 2
           WHC    S C+   S+IC+LPK +WSWD   H S++SEW  +C  S
Sbjct: 65  WHCTDSNSICHESISNICILPKTAWSWDYSPHVSVISEWGLQCAGS 110


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