BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046953
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   132   3e-29
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   122   2e-26
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   120   1e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                119   3e-25
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo...   119   3e-25

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/112 (56%), Positives = 76/112 (67%)
 Frame = +1

Query: 1   PKVDHPMNVGEFRPISLCNVLYKCVSKILANRIKDCLHLIVEENQNAFISGRRISDNILL 180
           PKV H   V EFRPI+ C V+YK +SK+L NR+K  +  +V E Q+ FI GR I+DNILL
Sbjct: 503 PKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILL 562

Query: 181 TQELFRDYHRQEGPPRCAFKVDIRKAYDSVNWDFSFSALHLFGFPEKLVGWI 336
             EL R Y R+   PRC  KVDIRKAYDSV W F  + L+ FGFP + VGWI
Sbjct: 563 ASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWI 614


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/113 (49%), Positives = 75/113 (66%)
 Frame = +1

Query: 1    PKVDHPMNVGEFRPISLCNVLYKCVSKILANRIKDCLHLIVEENQNAFISGRRISDNILL 180
            PK D  + + ++RPIS CNVLYK +SKILANR+K  L   + +NQ+AF+  R + +N+LL
Sbjct: 815  PKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLL 874

Query: 181  TQELFRDYHRQEGPPRCAFKVDIRKAYDSVNWDFSFSALHLFGFPEKLVGWIK 339
              EL +DYH++   PRCA K+DI KA+DSV W F  + L    FPE    WIK
Sbjct: 875  ATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIK 927


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1277

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/113 (48%), Positives = 74/113 (65%)
 Frame = +1

Query: 1   PKVDHPMNVGEFRPISLCNVLYKCVSKILANRIKDCLHLIVEENQNAFISGRRISDNILL 180
           PK D    + ++RPIS CNV+YK +SKI+ANR+K  L   + +NQ+AF+  R + +N+LL
Sbjct: 660 PKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLL 719

Query: 181 TQELFRDYHRQEGPPRCAFKVDIRKAYDSVNWDFSFSALHLFGFPEKLVGWIK 339
             EL +DYH+    PRCA K+DI KA+DSV W F  + L    FPEK   WIK
Sbjct: 720 ATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIK 772


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/113 (47%), Positives = 73/113 (64%)
 Frame = +1

Query: 1   PKVDHPMNVGEFRPISLCNVLYKCVSKILANRIKDCLHLIVEENQNAFISGRRISDNILL 180
           PK D    + ++RPIS CNV+YK +SKI+ANR+K  L   + +NQ+AF+  R + +N+LL
Sbjct: 91  PKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLL 150

Query: 181 TQELFRDYHRQEGPPRCAFKVDIRKAYDSVNWDFSFSALHLFGFPEKLVGWIK 339
             EL +DYH+    PRCA K+DI KA+DSV W F  + L    FPE    WIK
Sbjct: 151 ATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIK 203


>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
          Length = 469

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
 Frame = +1

Query: 1   PKVDHPMNVGEFRPISLCNVLYKCVSKILANRIKDCLHLIVEENQNAFISGRRISDNILL 180
           PKV+ PM + EFRPISLCNV+YK VSK L NR++  L  ++ +NQ+AF+ GR I+DN LL
Sbjct: 176 PKVNQPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPGRMITDNALL 235

Query: 181 TQELFRDYHRQEGPPR--CAFKVDIRKAYDSVNWDFSFSALHLFGFPEKLVGWI 336
             E F    R + P +  CA+K+D+ KAYD V+W F   A++  GF  + V WI
Sbjct: 236 AFECFHSIQRNKSPGKAACAYKLDLSKAYDRVDWSFLEQAMYKLGFTHRWVSWI 289