BLASTX nr result

ID: Cnidium21_contig00046940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046940
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    94   4e-26
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    98   4e-24
dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana]         86   9e-23
ref|NP_189591.1| General transcription factor 2-related zinc fin...    86   9e-23
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    92   3e-22

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 94.0 bits (232), Expect(2) = 4e-26
 Identities = 43/95 (45%), Positives = 67/95 (70%)
 Frame = +3

Query: 84  IFSTIALLTNVVGGSCKRRDMLRENRFKKVVEQLNSDEIIAGRGLNQEITLK*AAYTCWG 263
           +F+ I+ + N+VG SCKR +++RE ++ +++E L + EI +GRGLNQE +L+    T WG
Sbjct: 403 VFNFISSIINIVGASCKRMEVIREKQYARIIEGLENGEISSGRGLNQETSLRRYGDTRWG 462

Query: 264 SHYGVILNLISLFSSVFDLLEFVENTCTLSEQRSE 368
           SHY  I+ L+++FSSV D+LE +      SEQR+E
Sbjct: 463 SHYVTIIRLLAMFSSVLDVLEIIREDGMNSEQRTE 497



 Score = 48.9 bits (115), Expect(2) = 4e-26
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   SAYFVQCFAHQLQLTLVAVDKNHKKLGYFFNY 97
           SAY+V CFAH+LQLTLVAV K H ++G  FN+
Sbjct: 375 SAYYVHCFAHRLQLTLVAVTKKHNEVGDVFNF 406


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 98.2 bits (243), Expect(2) = 4e-24
 Identities = 47/95 (49%), Positives = 68/95 (71%)
 Frame = +3

Query: 84  IFSTIALLTNVVGGSCKRRDMLRENRFKKVVEQLNSDEIIAGRGLNQEITLK*AAYTCWG 263
           +FS I+ LTNVVGGSCKR DMLRE +  +V E L + EI++GRGLNQE  +K +A T W 
Sbjct: 506 LFSVISTLTNVVGGSCKRTDMLRERQRIRVKEALENGEIVSGRGLNQEPNMKRSADTRWS 565

Query: 264 SHYGVILNLISLFSSVFDLLEFVENTCTLSEQRSE 368
           SH+  ++NLI ++SS+ D+LE + +  ++ + R E
Sbjct: 566 SHFATLVNLILMYSSITDVLEMLRDDVSIKDGRGE 600



 Score = 38.1 bits (87), Expect(2) = 4e-24
 Identities = 14/30 (46%), Positives = 23/30 (76%)
 Frame = +2

Query: 5   AYFVQCFAHQLQLTLVAVDKNHKKLGYFFN 94
           A++V CFAHQLQL L+A+ ++H ++   F+
Sbjct: 479 AFYVHCFAHQLQLALIAIARDHLQVNSLFS 508


>dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana]
          Length = 571

 Score = 86.3 bits (212), Expect(2) = 9e-23
 Identities = 41/94 (43%), Positives = 64/94 (68%)
 Frame = +3

Query: 87  FSTIALLTNVVGGSCKRRDMLRENRFKKVVEQLNSDEIIAGRGLNQEITLK*AAYTCWGS 266
           F  I++L NVVG SCKR+D +R+   KK+ E++N  EI  G+GLNQ+++L+    T WG+
Sbjct: 319 FDMISVLINVVGASCKRKDRVRDEFRKKLEERINQGEIKTGKGLNQKLSLQRPGNTRWGT 378

Query: 267 HYGVILNLISLFSSVFDLLEFVENTCTLSEQRSE 368
           HY  +L L+ LFS +  +LE++E+  T S +R +
Sbjct: 379 HYTTLLRLVDLFSVIIKVLEWIEDDGTDSTKRRQ 412



 Score = 45.4 bits (106), Expect(2) = 9e-23
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +2

Query: 2   SAYFVQCFAHQLQLTLVAVDKNHKKLGYFFN 94
           SAY++ CFAHQLQL +VAV K H ++G FF+
Sbjct: 290 SAYYIHCFAHQLQLVVVAVAKKHFEIGDFFD 320


>ref|NP_189591.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644064|gb|AEE77585.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 522

 Score = 86.3 bits (212), Expect(2) = 9e-23
 Identities = 41/94 (43%), Positives = 64/94 (68%)
 Frame = +3

Query: 87  FSTIALLTNVVGGSCKRRDMLRENRFKKVVEQLNSDEIIAGRGLNQEITLK*AAYTCWGS 266
           F  I++L NVVG SCKR+D +R+   KK+ E++N  EI  G+GLNQ+++L+    T WG+
Sbjct: 270 FDMISVLINVVGASCKRKDRVRDEFRKKLEERINQGEIKTGKGLNQKLSLQRPGNTRWGT 329

Query: 267 HYGVILNLISLFSSVFDLLEFVENTCTLSEQRSE 368
           HY  +L L+ LFS +  +LE++E+  T S +R +
Sbjct: 330 HYTTLLRLVDLFSVIIKVLEWIEDDGTDSTKRRQ 363



 Score = 45.4 bits (106), Expect(2) = 9e-23
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +2

Query: 2   SAYFVQCFAHQLQLTLVAVDKNHKKLGYFFN 94
           SAY++ CFAHQLQL +VAV K H ++G FF+
Sbjct: 241 SAYYIHCFAHQLQLVVVAVAKKHFEIGDFFD 271


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 92.0 bits (227), Expect(2) = 3e-22
 Identities = 45/94 (47%), Positives = 63/94 (67%)
 Frame = +3

Query: 87  FSTIALLTNVVGGSCKRRDMLRENRFKKVVEQLNSDEIIAGRGLNQEITLK*AAYTCWGS 266
           F  +  ++N+VGGSCKRRDMLR+++ +KV ++L   EI +GRGLNQE T+     T WGS
Sbjct: 408 FMAVNNVSNMVGGSCKRRDMLRKSQIRKVADELGCGEISSGRGLNQESTVTRVGDTRWGS 467

Query: 267 HYGVILNLISLFSSVFDLLEFVENTCTLSEQRSE 368
           HYG +L L SLF S+ D+L  +    + S+ R E
Sbjct: 468 HYGTLLRLASLFPSMCDVLNMILEDSSNSDHRVE 501



 Score = 37.7 bits (86), Expect(2) = 3e-22
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +2

Query: 5   AYFVQCFAHQLQLTLVAVDKNHKKLGYFF 91
           A++V CFAHQLQL LVAV +    + +FF
Sbjct: 380 AFYVHCFAHQLQLALVAVARKLDDIAWFF 408


Top