BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046928
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   117   1e-24
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   114   6e-24
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   113   2e-23
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   112   3e-23
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   111   5e-23

>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339 VWSRMQSWKGTILS-GGK*ILIKSVLQAIPSYVMSVFMLPKKLCKLCEEIENLMNRFWWV 163
           +W R+Q W+  +LS  GK ILIK V QAIPSY MS F+LP     L EE++ +MN FWW 
Sbjct: 173 LWRRLQGWQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLP---ISLSEELQKMMNSFWWG 229

Query: 162 SKMENSRGIRWMCWDKLCNPKKFGGMGFRKIKEMNLAMLGKHA*RLLTDSNSFV 1
            K +  R I W+ WDKLC  K+ GG+GFR +++ NLAMLGK    L+T  +S +
Sbjct: 230 PKSDGGRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLI 283


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339 VWSRMQSWKGTILS-GGK*ILIKSVLQAIPSYVMSVFMLPKKLCKLCEEIENLMNRFWWV 163
           +W R+  W+G  LS  GK ++IKSVLQ+IPSY+MS+++LP  +    ++IE ++N FWW 
Sbjct: 160 IWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVI---DDIEKMVNAFWWG 216

Query: 162 SKMENSRGIRWMCWDKLCNPKKFGGMGFRKIKEMNLAMLGKHA*RLLTDSNSFV 1
            +  N+RGI+WM W+ +  PK+FGGMGFR  K  N+AM+ K    LL+   S V
Sbjct: 217 GR-SNNRGIKWMAWEHMACPKEFGGMGFRNFKAFNIAMVAKQGWSLLSTPESLV 269


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/112 (50%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = -1

Query: 339 VWSRMQSWKGTILS-GGK*ILIKSVLQAIPSYVMSVFMLPKKLCKLCEEIENLMNRFWWV 163
           +W + QSW    LS   K +LIKSV QAIPSY M  F++P     LCEE+E +MN F+W 
Sbjct: 303 IWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIP---ASLCEELERMMNSFYWG 359

Query: 162 SKMENSRGIRWMCWDKLCNPKKFGGMGFRKIKEMNLAMLGKHA*RLLTDSNS 7
           SK    RGI WM WD L   K  GG+GFR ++  NL+MLGK   +LL+DS+S
Sbjct: 360 SKKNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLSDSSS 411


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/114 (49%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339  VWSRMQSWKGTILS-GGK*ILIKSVLQAIPSYVMSVFMLPKKLCKLCEEIENLMNRFWWV 163
            VW+R+Q+W G  LS  GK I +K+V Q+IP+YVM + +LPK LC+   +IE++MN F+W 
Sbjct: 1327 VWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCR---DIESMMNXFFWD 1383

Query: 162  SKMENSRGIRWMCWDKLCNPKKFGGMGFRKIKEMNLAMLGKHA*RLLTDSNSFV 1
            S  +  R IRWM W K+C  KK GG+GFRK+++ NLA+L K   R L + +S V
Sbjct: 1384 SNPQX-RSIRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLV 1436


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339 VWSRMQSWKGTILS-GGK*ILIKSVLQAIPSYVMSVFMLPKKLCKLCEEIENLMNRFWWV 163
           VW+R+Q+W G  LS  GK I +K+V Q+IP+YVM + +LPK LC+   +IE++MN F+W 
Sbjct: 240 VWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCR---DIESMMNGFFWD 296

Query: 162 SKMENSRGIRWMCWDKLCNPKKFGGMGFRKIKEMNLAMLGKHA*RLLTDSNSFV 1
           S  +  R IRWM W K+C  KK GG+GFRK+ + NLA+L K   R L + +S V
Sbjct: 297 SNPQ-CRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLV 349