BLASTX nr result

ID: Cnidium21_contig00046885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046885
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   157   8e-37
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   144   1e-32
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   140   8e-32
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   132   2e-29
dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana] g...   131   5e-29

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  157 bits (397), Expect = 8e-37
 Identities = 70/154 (45%), Positives = 103/154 (66%)
 Frame = -1

Query: 473 KRSILIALSAGNKFCFVDGSLPKPAITSPSYKSWSRCNDMVISWILGALSKTIGRSVIYS 294
           KR +LI+LSA NK  F+ G+  KP      ++ W RC+DMV++W+L +LSK I  SV+YS
Sbjct: 63  KRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYS 122

Query: 293 TTAHQMWLELEERYGVSNGAQLFGLHKELTEISQGNQSISHYFTKIKMLWDDIDSLSLAP 114
            TA ++W ELE+RYG  +G ++F L +EL  +SQG   ++ YF K+K +WD +  L+   
Sbjct: 123 QTAQELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAAYFNKLKRIWDQMKVLNTFM 182

Query: 113 ACTCDCTCGAAQKLAQTHQDQRVIQFLMGLNDSY 12
            C+C+C C A    A+  +DQ++IQFLMGLN+ Y
Sbjct: 183 VCSCECNCEAKGHNAKMQEDQQLIQFLMGLNEVY 216


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/153 (43%), Positives = 100/153 (65%)
 Frame = -1

Query: 470 RSILIALSAGNKFCFVDGSLPKPAITSPSYKSWSRCNDMVISWILGALSKTIGRSVIYST 291
           R++ I+LSA +K  FV GS+  P+ T  S+ SW RCNDMVISW+L ++   I  SVIY+ 
Sbjct: 45  RAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASSVIYAE 104

Query: 290 TAHQMWLELEERYGVSNGAQLFGLHKELTEISQGNQSISHYFTKIKMLWDDIDSLSLAPA 111
           T  ++W +L ER+   N ++++ + +++ E  QG QSIS Y+TK+K  WD++ S      
Sbjct: 105 TTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSSYHE--- 161

Query: 110 CTCDCTCGAAQKLAQTHQDQRVIQFLMGLNDSY 12
               C+CG  +KL +  + +RV+QFLMGLNDSY
Sbjct: 162 -VLSCSCGGLEKLKEMDEKERVMQFLMGLNDSY 193


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/153 (43%), Positives = 100/153 (65%)
 Frame = -1

Query: 470 RSILIALSAGNKFCFVDGSLPKPAITSPSYKSWSRCNDMVISWILGALSKTIGRSVIYST 291
           R++ I+LSA +K  FV GS+  P+ T  S+ SW RCNDMVISW+L ++   I  SVIY+ 
Sbjct: 48  RAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASSVIYAE 107

Query: 290 TAHQMWLELEERYGVSNGAQLFGLHKELTEISQGNQSISHYFTKIKMLWDDIDSLSLAPA 111
           TA ++W +L ER+   N ++++ + +++ E  QG QSIS Y+TK+K   D++ S      
Sbjct: 108 TASEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFXDELSSYHE--- 164

Query: 110 CTCDCTCGAAQKLAQTHQDQRVIQFLMGLNDSY 12
               C+CG  +KL +  + +RV+QFLMGLNDSY
Sbjct: 165 -VLSCSCGGLEKLKERDEKERVMQFLMGLNDSY 196


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/153 (40%), Positives = 98/153 (64%)
 Frame = -1

Query: 470 RSILIALSAGNKFCFVDGSLPKPAITSPSYKSWSRCNDMVISWILGALSKTIGRSVIYST 291
           R++++AL+A NK  F+DGS+P P      + +W RCN MVISWIL ++ K I  S++Y  
Sbjct: 55  RAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIADSLLYFD 114

Query: 290 TAHQMWLELEERYGVSNGAQLFGLHKELTEISQGNQSISHYFTKIKMLWDDIDSLSLAPA 111
           TA  +W +L +R+  SNG ++F + K L  +SQG+  +S Y+T++K+LWD++      P 
Sbjct: 115 TAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVSTYYTRLKILWDELKGFQPLP- 173

Query: 110 CTCDCTCGAAQKLAQTHQDQRVIQFLMGLNDSY 12
              +C CG  +   +  Q + V+QFLMGLN+S+
Sbjct: 174 ---ECACGTMKTWMEFQQQEYVMQFLMGLNESF 203


>dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
           gi|26450382|dbj|BAC42306.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis
           thaliana]
          Length = 357

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/154 (39%), Positives = 99/154 (64%)
 Frame = -1

Query: 473 KRSILIALSAGNKFCFVDGSLPKPAITSPSYKSWSRCNDMVISWILGALSKTIGRSVIYS 294
           K ++ +AL A NK  FVDG+LP+P    PS++ WSRCN MV SWIL +++K I +S++  
Sbjct: 93  KIAMFVALDAKNKIAFVDGTLPRPPEFDPSFRVWSRCNSMVKSWILNSVTKQIYKSILRF 152

Query: 293 TTAHQMWLELEERYGVSNGAQLFGLHKELTEISQGNQSISHYFTKIKMLWDDIDSLSLAP 114
             A ++W +L+ R+ ++N  + + L +++  + QGN S+S Y+T +K LWDD+D  S   
Sbjct: 153 NDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGNMSLSDYYTTLKTLWDDLDGASCVN 212

Query: 113 ACTCDCTCGAAQKLAQTHQDQRVIQFLMGLNDSY 12
            C  +C C +A   A  ++  ++++FL GLND Y
Sbjct: 213 TCR-NCKCCSA--TASVNEHSKIVKFLAGLNDFY 243


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