BLASTX nr result

ID: Cnidium21_contig00046882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046882
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            108   5e-22
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   103   1e-20
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   102   3e-20
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   102   3e-20
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   101   6e-20

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/86 (58%), Positives = 62/86 (72%)
 Frame = +3

Query: 6   PYLDSLNNVLAITEPSSYAKANNDPNWVEAMDKEIAALESNNTWELTTLPPGKHSIGCKW 185
           PY  SL N  AI EP+SY +A    +W++AM+ E+ AL  N+TW+L  LP GK +IGCKW
Sbjct: 662 PYFQSLCNFSAIPEPTSYNEAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKW 721

Query: 186 VYKVKFNPNGSIERYKARLVARGDKQ 263
           VYKVKFN  G +ERYKARLVA+G  Q
Sbjct: 722 VYKVKFNAQGEVERYKARLVAKGYTQ 747


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/76 (60%), Positives = 59/76 (77%)
 Frame = +3

Query: 36   AITEPSSYAKANNDPNWVEAMDKEIAALESNNTWELTTLPPGKHSIGCKWVYKVKFNPNG 215
            A TEPSS+ +A+ DP W +AM  E+ ALE NNTWE+  LPPG   IGC+WVYK+K++ +G
Sbjct: 1216 AQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDG 1275

Query: 216  SIERYKARLVARGDKQ 263
            +IERYKARLVA+G  Q
Sbjct: 1276 TIERYKARLVAKGYTQ 1291


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/86 (54%), Positives = 60/86 (69%)
 Frame = +3

Query: 6    PYLDSLNNVLAITEPSSYAKANNDPNWVEAMDKEIAALESNNTWELTTLPPGKHSIGCKW 185
            PY+  +N V  I EP +YA+A     W +AM  EI ALE N TW + +LP GK ++GCKW
Sbjct: 901  PYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPVGKKAVGCKW 960

Query: 186  VYKVKFNPNGSIERYKARLVARGDKQ 263
            VYK+K N +GS+ERYKARLVA+G  Q
Sbjct: 961  VYKIKLNADGSLERYKARLVAKGYTQ 986


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/81 (54%), Positives = 61/81 (75%)
 Frame = +3

Query: 21   LNNVLAITEPSSYAKANNDPNWVEAMDKEIAALESNNTWELTTLPPGKHSIGCKWVYKVK 200
            +NN+  I  P++YA+A +   W EA+D EI A+E  NTWE+TTLP GK ++GCKWV+ +K
Sbjct: 931  INNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLK 990

Query: 201  FNPNGSIERYKARLVARGDKQ 263
            F  +G++ERYKARLVA+G  Q
Sbjct: 991  FLADGNLERYKARLVAKGYTQ 1011


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/73 (60%), Positives = 59/73 (80%)
 Frame = +3

Query: 45  EPSSYAKANNDPNWVEAMDKEIAALESNNTWELTTLPPGKHSIGCKWVYKVKFNPNGSIE 224
           EP+SYA+A +  +W EAM  E+A LE+N+TW LT+LPPGK  IGC+WVYK+K + +G+IE
Sbjct: 629 EPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVYKIKXHSDGTIE 688

Query: 225 RYKARLVARGDKQ 263
           R+KARLVA+G  Q
Sbjct: 689 RFKARLVAKGYTQ 701


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