BLASTX nr result

ID: Cnidium21_contig00046880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046880
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
emb|CBI19926.3| unnamed protein product [Vitis vinifera]              195   4e-48
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   194   8e-48
ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,...   169   2e-40

>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/150 (62%), Positives = 116/150 (77%)
 Frame = -2

Query: 457 LLERGPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAG 278
           LL  GPPPD IT+ GVL ACN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G
Sbjct: 461 LLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGG 520

Query: 277 HLEEALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAK 98
            L+EA++I+E MP EP  L W S L A E+Y DL+  ER +ER+ ELEPQSSLPY+VLA+
Sbjct: 521 KLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQ 580

Query: 97  AYERRGRWESLVRVKKVMEKSRAKEVVGFS 8
           AYE RGRWESLVRV++ M++   ++V+G S
Sbjct: 581 AYEMRGRWESLVRVRRAMKEKGVRKVIGCS 610


>emb|CBI19926.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/150 (62%), Positives = 116/150 (77%)
 Frame = -2

Query: 457 LLERGPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAG 278
           LL  GPPPD IT+ GVL ACN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G
Sbjct: 208 LLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGG 267

Query: 277 HLEEALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAK 98
            L+EA++I+E MP EP  L W S L A E+Y DL+  ER +ER+ ELEPQSSLPY+VLA+
Sbjct: 268 KLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQ 327

Query: 97  AYERRGRWESLVRVKKVMEKSRAKEVVGFS 8
           AYE RGRWESLVRV++ M++   ++V+G S
Sbjct: 328 AYEMRGRWESLVRVRRAMKEKGVRKVIGCS 357


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/150 (62%), Positives = 115/150 (76%)
 Frame = -2

Query: 457  LLERGPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAG 278
            LL  GPPPD IT+ GVL ACN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G
Sbjct: 1134 LLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGG 1193

Query: 277  HLEEALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAK 98
             L+EA++I+E MP EP  L W S L A E+Y DL+  ER +ER+ ELEPQSSLPY+VLA+
Sbjct: 1194 KLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQ 1253

Query: 97   AYERRGRWESLVRVKKVMEKSRAKEVVGFS 8
            AYE RGRWESLVRV + M++   ++V+G S
Sbjct: 1254 AYEMRGRWESLVRVXRAMKEKGVRKVIGCS 1283



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/145 (34%), Positives = 80/145 (55%)
 Frame = -2

Query: 445 GPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAGHLEE 266
           G  P  IT  GVLSAC++ G V+EG   F  M+  Y + P  EHY C+VD+ +RAG LE+
Sbjct: 533 GVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLED 592

Query: 265 ALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAKAYER 86
           A+N++E MP +     W S L     + +    ++ ++RI +L+P++S  Y+ L+  Y  
Sbjct: 593 AMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYAT 652

Query: 85  RGRWESLVRVKKVMEKSRAKEVVGF 11
              W    +V+K+M   +  +   F
Sbjct: 653 FEDWGRSAQVRKLMYDKKIPKDTSF 677


>ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|222856116|gb|EEE93663.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  180 bits (456), Expect = 1e-43
 Identities = 82/150 (54%), Positives = 115/150 (76%)
 Frame = -2

Query: 457 LLERGPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAG 278
           L+  G PPD IT+ GVL AC++GGF+ EGM++F+ ME++YGVKP +EHY C VD++ +AG
Sbjct: 439 LIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYGVKPSNEHYACFVDLLCQAG 498

Query: 277 HLEEALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAK 98
            L+EAL + E+MP EP  L W S L+A  ++ DLK  ER +ER+ ELEPQSSLPY+VLA+
Sbjct: 499 RLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVAERLMELEPQSSLPYLVLAR 558

Query: 97  AYERRGRWESLVRVKKVMEKSRAKEVVGFS 8
            +E RG+WE +VRVKK M++ + ++V+G S
Sbjct: 559 MFEIRGQWEGVVRVKKAMKRGKVEKVIGCS 588


>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/150 (52%), Positives = 113/150 (75%)
 Frame = -2

Query: 457 LLERGPPPDHITMTGVLSACNYGGFVDEGMSIFALMEKQYGVKPVSEHYVCVVDMMSRAG 278
           LL RGPPPD IT+ GVL AC+YGGF++EGM+IF+ M+  YG+ P +EHY  +V+++ +AG
Sbjct: 332 LLNRGPPPDRITLAGVLLACSYGGFIEEGMTIFSSMQGSYGIIPSNEHYASIVNLLCQAG 391

Query: 277 HLEEALNILEAMPCEPKVLGWISFLYASEMYNDLKSMERASERIFELEPQSSLPYMVLAK 98
            L+EA++++EAMP EP  +   S L+A  +  DLK ME  +ER+ ++   SSLPY+VLA+
Sbjct: 392 WLDEAMSMIEAMPSEPNSMTCRSILHACAIRGDLKLMEGVAERLVDIGSLSSLPYLVLAR 451

Query: 97  AYERRGRWESLVRVKKVMEKSRAKEVVGFS 8
            YE RG+WE++VRVKK ME+++AK V G S
Sbjct: 452 MYEMRGQWEAVVRVKKTMERTKAKTVDGCS 481


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