BLASTX nr result

ID: Cnidium21_contig00046874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046874
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97040.1| retrotransposon protein, putative, unclassified [...   100   9e-20
gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo...   100   9e-20
gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indi...   100   2e-19
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    99   4e-19
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    98   6e-19

>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1913

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = -3

Query: 266  AILGFFSTSIMHKGINSTAIALIPKVPTPSSMKDYRPISLCSIAYKCIAKILAGRLQNVL 87
            A+  FF TSIM +G+N TAI LIPKV  P  +KD+RPISLC++ YK ++K L  RL+ +L
Sbjct: 1045 AVKSFFETSIMPEGVNDTAIVLIPKVDQPMELKDFRPISLCNVIYKIVSKCLVNRLRPIL 1104

Query: 86   PGLIDISQSAFIKGRHITDNVLMAQELF 3
              L+  +QSAF+ GR ITDN L+A E F
Sbjct: 1105 DELVSQNQSAFVPGRMITDNALLAFECF 1132


>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
          Length = 813

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = -3

Query: 266 AILGFFSTSIMHKGINSTAIALIPKVPTPSSMKDYRPISLCSIAYKCIAKILAGRLQNVL 87
           A+  FF TSIM +G+N TAI LIPKV  P  +KD+RPISLC++ YK ++K L  RL+ +L
Sbjct: 544 AVKSFFETSIMPEGVNDTAIVLIPKVDQPMELKDFRPISLCNVIYKIVSKCLVNRLRPIL 603

Query: 86  PGLIDISQSAFIKGRHITDNVLMAQELF 3
             L+  +QSAF+ GR ITDN L+A E F
Sbjct: 604 DELVSQNQSAFVPGRMITDNALLAFECF 631


>gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indica Group]
          Length = 1143

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/88 (53%), Positives = 63/88 (71%)
 Frame = -3

Query: 266 AILGFFSTSIMHKGINSTAIALIPKVPTPSSMKDYRPISLCSIAYKCIAKILAGRLQNVL 87
           A+  FF T +M +G+N+TAI LIPK+  P  +KDYRPISLC++ YK ++K L  RL+ VL
Sbjct: 402 AVRDFFQTGLMPEGVNNTAIVLIPKIEQPLELKDYRPISLCNVVYKVVSKCLVNRLRPVL 461

Query: 86  PGLIDISQSAFIKGRHITDNVLMAQELF 3
             ++   QSAFI+GR ITDN L+A E F
Sbjct: 462 DEVVSEEQSAFIQGRMITDNALLAFECF 489


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = -3

Query: 266  AILGFFSTSIMHKGINSTAIALIPKVPTPSSMKDYRPISLCSIAYKCIAKILAGRLQNVL 87
            A+  FF + +M KG+N TAI LIPK   P  +KDYRPISLC++ YK ++K L  RL+ +L
Sbjct: 1110 AVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPIL 1169

Query: 86   PGLIDISQSAFIKGRHITDNVLMAQELF 3
              L+   QSAFI+GR ITDN L+A E F
Sbjct: 1170 DDLVSKEQSAFIQGRMITDNALLAFECF 1197


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1188

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/89 (52%), Positives = 63/89 (70%)
 Frame = -3

Query: 269 EAILGFFSTSIMHKGINSTAIALIPKVPTPSSMKDYRPISLCSIAYKCIAKILAGRLQNV 90
           +A+  FF+T +M  G+N TAI LIPKV  P  ++DYRPISLC++ YK ++K L  RL+ +
Sbjct: 333 KAVKEFFNTGVMPAGVNETAIVLIPKVDQPIELRDYRPISLCNVLYKVVSKCLVNRLRPI 392

Query: 89  LPGLIDISQSAFIKGRHITDNVLMAQELF 3
           L  LI  +QSAF+ GR ITDN L+A E F
Sbjct: 393 LDELISPNQSAFVPGRMITDNALIAFECF 421


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