BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046871
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   152   4e-35
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   145   4e-33
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   145   4e-33
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   143   1e-32
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   135   5e-30

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/126 (58%), Positives = 94/126 (74%)
 Frame = +3

Query: 3   DLVEFLGSLDKAKALAILQKMHKLQYMCCDPMQFINNQLEFQKKNGKDFTSLSLSKSTNP 182
           DL+E L  L+   A+ ILQKMHKLQ  C +P+ FI  +L    KN K+  S S S+  N 
Sbjct: 312 DLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQ 371

Query: 183 NVMSCHRVLITPSKIYCLGPELESSSYVVKNFASYASDFLRVTFVDEDLGKLHPHTVSTS 362
           N+MS HRVL+TPSK+YCLGPELE+S+Y+VKNFA +ASDFLRVTFV+ED GKL P+ +S S
Sbjct: 372 NMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMS 431

Query: 363 TQKGIF 380
            ++GIF
Sbjct: 432 VEQGIF 437


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/125 (56%), Positives = 96/125 (76%)
 Frame = +3

Query: 3   DLVEFLGSLDKAKALAILQKMHKLQYMCCDPMQFINNQLEFQKKNGKDFTSLSLSKSTNP 182
           DL++FL +LD   AL +LQ++H+L+++C DP+ F+  QL   K+N K     S  + +N 
Sbjct: 310 DLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSN- 368

Query: 183 NVMSCHRVLITPSKIYCLGPELESSSYVVKNFASYASDFLRVTFVDEDLGKLHPHTVSTS 362
           NVM+C+RVL+TPS+IYCLGPELE+S+YVVKNF+SYASDF+RVTFV+ED  KL    V+TS
Sbjct: 369 NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTS 428

Query: 363 TQKGI 377
            Q+GI
Sbjct: 429 IQRGI 433


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
           gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
           2 [Cucumis sativus]
          Length = 1117

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/125 (56%), Positives = 96/125 (76%)
 Frame = +3

Query: 3   DLVEFLGSLDKAKALAILQKMHKLQYMCCDPMQFINNQLEFQKKNGKDFTSLSLSKSTNP 182
           DL++FL +LD   AL +LQ++H+L+++C DP+ F+  QL   K+N K     S  + +N 
Sbjct: 310 DLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSN- 368

Query: 183 NVMSCHRVLITPSKIYCLGPELESSSYVVKNFASYASDFLRVTFVDEDLGKLHPHTVSTS 362
           NVM+C+RVL+TPS+IYCLGPELE+S+YVVKNF+SYASDF+RVTFV+ED  KL    V+TS
Sbjct: 369 NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTS 428

Query: 363 TQKGI 377
            Q+GI
Sbjct: 429 IQRGI 433


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223550546|gb|EEF52033.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 983

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/126 (59%), Positives = 87/126 (69%)
 Frame = +3

Query: 3   DLVEFLGSLDKAKALAILQKMHKLQYMCCDPMQFINNQLEFQKKNGKDFTSLSLSKSTNP 182
           +L+  LGSL    A  ILQK+HKL   C DP+ FI  QL    +N K     S     N 
Sbjct: 159 NLITTLGSLTIDTATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNH 218

Query: 183 NVMSCHRVLITPSKIYCLGPELESSSYVVKNFASYASDFLRVTFVDEDLGKLHPHTVSTS 362
           N+MSCHR LITPSKIYCLGPELESS+YVVKNFASYASDF+RVTFV+ED  KL  + +S S
Sbjct: 219 NIMSCHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMS 278

Query: 363 TQKGIF 380
            Q+GIF
Sbjct: 279 IQRGIF 284


>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
          Length = 1120

 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/126 (48%), Positives = 87/126 (69%)
 Frame = +3

Query: 3   DLVEFLGSLDKAKALAILQKMHKLQYMCCDPMQFINNQLEFQKKNGKDFTSLSLSKSTNP 182
           +L++ L  LD+     + QK+HK+ + C +P++F+  QL       K       ++ T+ 
Sbjct: 311 ELIDLLADLDEETRAVVFQKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLLQSPQNRLTDS 370

Query: 183 NVMSCHRVLITPSKIYCLGPELESSSYVVKNFASYASDFLRVTFVDEDLGKLHPHTVSTS 362
           N+MSCHR LITP+KIYCLGPELE+S++VVK+FAS ASDF+R+TFV+E+  KL  + VST 
Sbjct: 371 NIMSCHRALITPTKIYCLGPELETSNHVVKHFASLASDFMRITFVEENWNKLPTNAVSTG 430

Query: 363 TQKGIF 380
            QKGIF
Sbjct: 431 VQKGIF 436