BLASTX nr result

ID: Cnidium21_contig00046842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046842
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis ...    92   3e-17
ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|8947...    91   1e-16
ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [G...    84   2e-14
ref|XP_004134801.1| PREDICTED: scarecrow-like protein 13-like [C...    82   3e-14
gb|AFK42187.1| unknown [Medicago truncatula]                           79   4e-13

>ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis vinifera]
          Length = 545

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
 Frame = -1

Query: 373 YNEQFFTLDSFPADYVGYH----SPSAASTCS-RSPLSAQYSQSNRSDQHQSPDYTHXXX 209
           YNEQ+FTL+S P    GY+    SPSA S  S RSP S Q SQS  SD H SPD      
Sbjct: 55  YNEQYFTLESAPVT-AGYNVCDSSPSAGSISSNRSPFSPQGSQSYLSDPHHSPDNASGSP 113

Query: 208 XXXXXXXXXGNKLKHVLKELESKLLGPPSETDDVCSYSFTSATPEVTSLIKYDKLLQTIP 29
                    GN+L+H L+ELE  LLGP S+T D C+ SF S   +  S+ ++   ++ IP
Sbjct: 114 ISGSSGVDDGNELRHKLRELELSLLGPESDTTDSCNCSFRSGAHQAASIARWK--VEMIP 171

Query: 28  TLDVKQVLL 2
            LD+KQVL+
Sbjct: 172 RLDLKQVLV 180


>ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|89474462|gb|ABD72958.1|
           GRAS1 [Solanum lycopersicum]
          Length = 542

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -1

Query: 370 NEQFFTLDSFPA-DYVGYHSPSAASTCS-RSPLSAQYSQSNRSDQHQSPDYTHXXXXXXX 197
           +EQFFTLDS PA DYV   SP A S  S RSP S Q S+S  SD H S D T        
Sbjct: 54  DEQFFTLDSSPATDYVVNDSPPALSVSSNRSPFSPQCSRSYMSDLHHSSDNT-CGSPLSG 112

Query: 196 XXXXXGNKLKHVLKELESKLLGPPSETDDVCSYSFTSATPEVTSLIKYDKLLQTIPTLDV 17
                   L+HVL+ELE+KLLGP S+TDD CS S      + +S+ +++++L   P L++
Sbjct: 113 CSGIDDGDLRHVLRELENKLLGPESDTDDSCSCSLNDMVSKPSSVTRWNRVLDMAPGLNL 172

Query: 16  KQVL 5
           K++L
Sbjct: 173 KELL 176


>ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [Glycine max]
          Length = 552

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
 Frame = -1

Query: 367 EQFFTLDSFPA--DYVGYHSPSAASTCS-RSPLSAQYSQSNRSDQHQSPDYTHXXXXXXX 197
           +Q+FTL+S P   D +G  SPS AS  S RSP S Q S S  SDQHQS D T+       
Sbjct: 58  DQYFTLESSPVINDLIGCDSPSYASVSSNRSPFSPQASHSYHSDQHQSSDNTYGSPTSSH 117

Query: 196 XXXXXGNKLKHVLKELESKLLGPPSETDDVCSYSFTSATPEVTSLIKY--DKLLQTIPTL 23
                  +LK+ L+ELE  LLGP S+  D C  S+       + + KY  D++++ IP L
Sbjct: 118 STADDSYELKNKLRELEISLLGPDSDIVDSCHCSYKGGCHGASPMAKYNWDQIVEMIPKL 177

Query: 22  DVKQVLL 2
           ++K+VL+
Sbjct: 178 NLKEVLI 184


>ref|XP_004134801.1| PREDICTED: scarecrow-like protein 13-like [Cucumis sativus]
           gi|449526395|ref|XP_004170199.1| PREDICTED:
           scarecrow-like protein 13-like [Cucumis sativus]
          Length = 541

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
 Frame = -1

Query: 373 YNEQFFTLDSFPA--DYVGYHSPSAASTCS-RSPLSAQYSQSNRSDQHQSPDYTHXXXXX 203
           Y +QFFTL+SFPA  D  G +SPS  S  S RSP S Q SQS  SDQH S + T      
Sbjct: 47  YKDQFFTLESFPATADLSGSNSPSTGSVLSSRSPFSPQGSQSCSSDQHHSFENTCGSPMS 106

Query: 202 XXXXXXXGNKLKHVLKELESKLLGPPSETDDVCSYSFTSATPEVTSLIK--YDKLLQTIP 29
                   N +KH LKELE  LLGP S+  D C  SF        S+ +  ++++++ IP
Sbjct: 107 GCSVTDEDNDIKHKLKELEISLLGPESDIVDSCYCSFRGGAHRDASVARRNWNQVVEMIP 166

Query: 28  TLDVKQVLL 2
            L+++  L+
Sbjct: 167 KLNLQDTLI 175


>gb|AFK42187.1| unknown [Medicago truncatula]
          Length = 520

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
 Frame = -1

Query: 373 YNEQFFTLDSFP--ADYVGYHSPSAASTCS-RSPLSAQYSQSNRSDQHQSPDYTHXXXXX 203
           Y  Q FTL+S+P    ++   SPS AS  S R+P S Q SQS  SD HQSPD T+     
Sbjct: 48  YKPQRFTLESYPEITGFIDCDSPSYASVSSNRTPFSPQESQSCHSDHHQSPDNTYGSPIS 107

Query: 202 XXXXXXXGNKLKHVLKELESKLLGPPSETDDVCSYSFTSAT----PEVTSLIKYDKLLQT 35
                  GN LKH L+E+E+ LLG P + D V SY     T       ++   +D + + 
Sbjct: 108 GMSSVDDGNDLKHKLREIENSLLG-PEDFDIVDSYGSCMETNLHGASPSAKYNWDLIAEN 166

Query: 34  IPTLDVKQVLL 2
           IP LD+K+VLL
Sbjct: 167 IPKLDMKEVLL 177


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