BLASTX nr result

ID: Cnidium21_contig00046829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046829
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34822.1| unknown [Medicago truncatula]                           55   6e-06
ref|XP_003590011.1| hypothetical protein MTR_1g042820 [Medicago ...    55   6e-06

>gb|AFK34822.1| unknown [Medicago truncatula]
          Length = 186

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/74 (39%), Positives = 39/74 (52%)
 Frame = -1

Query: 385 MSSFKLKRKLFSATKAWNCFTKKFQAKTNNLNISKSIKLTTSHLLSLYQKTTLRFLNRQR 206
           MS  KL +KL  A KAW   +  FQ+K + LNISK+ K T  H+LSL+   T    ++ +
Sbjct: 1   MSRMKLSKKLKPAKKAWKNLSNNFQSKLHKLNISKTFKTTLQHILSLFHSLTHLITSKTK 60

Query: 205 RHNPYVRNSPSAAA 164
            H        S AA
Sbjct: 61  THRSLTSFKSSYAA 74


>ref|XP_003590011.1| hypothetical protein MTR_1g042820 [Medicago truncatula]
           gi|355479059|gb|AES60262.1| hypothetical protein
           MTR_1g042820 [Medicago truncatula]
          Length = 186

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/74 (39%), Positives = 39/74 (52%)
 Frame = -1

Query: 385 MSSFKLKRKLFSATKAWNCFTKKFQAKTNNLNISKSIKLTTSHLLSLYQKTTLRFLNRQR 206
           MS  KL +KL  A KAW   +  FQ+K + LNISK+ K T  H+LSL+   T    ++ +
Sbjct: 1   MSRMKLSKKLKPAKKAWKNLSNNFQSKLHKLNISKTFKTTLQHILSLFHSLTHLITSKTK 60

Query: 205 RHNPYVRNSPSAAA 164
            H        S AA
Sbjct: 61  THRSLTSFKSSYAA 74


Top