BLASTX nr result

ID: Cnidium21_contig00046817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046817
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...   111   7e-23
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...   109   3e-22
ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_004138131.1| PREDICTED: U-box domain-containing protein 3...   108   4e-22
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3...   107   1e-21

>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/106 (50%), Positives = 65/106 (61%)
 Frame = -3

Query: 318 MGGNSKHRWXXXXXXXXXXXXXXXXXXXXXXXKEFICPISGSLMFDPVVISSGQTYERTS 139
           MGGN KHRW                        EF CPISGSLM DPVV++SGQT+ER +
Sbjct: 1   MGGNGKHRWKFSFHRSSSQTSNPDPNQVPK---EFTCPISGSLMSDPVVVASGQTFERLA 57

Query: 138 AQVCRDLSFSPSLPDGSSPDFKALIPNLALKSTIITWCHTVGIMPP 1
            Q+C+DL+FSP L DG+ PDF  +IPNLA+K+TI+ WC      PP
Sbjct: 58  VQLCKDLNFSPKLDDGTRPDFSTIIPNLAIKTTILHWCDNSRTQPP 103


>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/106 (50%), Positives = 64/106 (60%)
 Frame = -3

Query: 318 MGGNSKHRWXXXXXXXXXXXXXXXXXXXXXXXKEFICPISGSLMFDPVVISSGQTYERTS 139
           MGGN KHRW                        EF CPISGSLM DPVV++SGQT+ER +
Sbjct: 1   MGGNGKHRWKFSFHRSSTHPPK-----------EFTCPISGSLMSDPVVVASGQTFERLA 49

Query: 138 AQVCRDLSFSPSLPDGSSPDFKALIPNLALKSTIITWCHTVGIMPP 1
            Q+C+DL+FSP L DG+ PDF  LIPNLA+K+TI+ WC       P
Sbjct: 50  VQLCKDLNFSPKLDDGTRPDFSTLIPNLAIKTTILHWCDNARTQHP 95


>ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|222868559|gb|EEF05690.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/106 (52%), Positives = 63/106 (59%)
 Frame = -3

Query: 318 MGGNSKHRWXXXXXXXXXXXXXXXXXXXXXXXKEFICPISGSLMFDPVVISSGQTYERTS 139
           MGGN K RW                        EFICPISGSLMFDPVV+SSGQT+ER S
Sbjct: 1   MGGNGKRRWKISFYSRSKPTQTQHQQQQPPK--EFICPISGSLMFDPVVVSSGQTFERLS 58

Query: 138 AQVCRDLSFSPSLPDGSSPDFKALIPNLALKSTIITWCHTVGIMPP 1
            QVC DL F P+L D S PDF  +IPNLA+K+TI  WC + G   P
Sbjct: 59  VQVCHDLGFIPTLQDNSLPDFTNVIPNLAIKTTIQNWCDSSGTQHP 104


>ref|XP_004138131.1| PREDICTED: U-box domain-containing protein 38-like [Cucumis
           sativus] gi|449477368|ref|XP_004155003.1| PREDICTED:
           U-box domain-containing protein 38-like [Cucumis
           sativus]
          Length = 536

 Score =  108 bits (271), Expect = 4e-22
 Identities = 55/109 (50%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -3

Query: 318 MGGNSKHRWXXXXXXXXXXXXXXXXXXXXXXXKEFICPISGSLMFDPVVISSGQTYERTS 139
           MGGN K RW                        EF+CP+SGSLM DPVV+S+GQT++R S
Sbjct: 1   MGGNGKSRWKFLFPHRRNSRLQSNDPPK-----EFLCPVSGSLMADPVVVSTGQTFDRVS 55

Query: 138 AQVCRDLSFSPSLPDGSSPDFKALIPNLALKSTIITWCHTVG---IMPP 1
           AQVCR+L FSP L DGS PDF  +IPNLA+K TI+ WC   G   + PP
Sbjct: 56  AQVCRNLGFSPVLDDGSKPDFTTVIPNLAMKKTILHWCEKSGARNLQPP 104


>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
          Length = 523

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/98 (54%), Positives = 62/98 (63%)
 Frame = -3

Query: 318 MGGNSKHRWXXXXXXXXXXXXXXXXXXXXXXXKEFICPISGSLMFDPVVISSGQTYERTS 139
           MGGN KHRW                        EF+CPISGSLM DPVV++SGQT+ER S
Sbjct: 1   MGGNGKHRWKISFRSSSSMPKQSPK--------EFMCPISGSLMADPVVVASGQTFERIS 52

Query: 138 AQVCRDLSFSPSLPDGSSPDFKALIPNLALKSTIITWC 25
            QVCR+L+F P L DGS PDF  +IPNLA+KS I+ WC
Sbjct: 53  VQVCRNLAFVPVLGDGSRPDFTVVIPNLAMKSAILNWC 90


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