BLASTX nr result

ID: Cnidium21_contig00046794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046794
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...   150   1e-34
ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...   144   8e-33
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]   144   8e-33
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30

>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  150 bits (379), Expect = 1e-34
 Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
 Frame = -3

Query: 566 RKFECHYCFRNFPTSQALGGHQNAHKRERQQAKRA----AMGYDIYPQAHVHGMNYHRFG 399
           R+FECHYC RNFPTSQALGGHQNAHKRERQ AKRA    AM ++ +  AH++GM  +R G
Sbjct: 71  RRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSDAHIYGMMNYRIG 130

Query: 398 SGSFNSQVTTYNQYP-WNSNSTVYNRFYGGYGSYNQAQTPPIHGSPLSMWQIPSVNNVPR 222
           S       T    YP WNS++   +RFYG +GSY Q    PI+GSPL +W+IP+V++   
Sbjct: 131 SNP-----TPAMSYPSWNSHAN-SSRFYGSHGSYPQ---QPINGSPLGLWRIPTVHSSAT 181

Query: 221 LNHDQYLTTISSPLYPNIDSLQPSGNESSSSQNRYVYQSN-NLKDHVSLDLHL 66
           L+ D+ +  +  PL+   + L+ S    SSSQ RY Y+   +++DHVSLDLHL
Sbjct: 182 LHRDRSMNPL--PLFSG-EELKLSQVGGSSSQGRYGYEGKPSVQDHVSLDLHL 231


>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score =  144 bits (364), Expect = 8e-33
 Identities = 89/177 (50%), Positives = 115/177 (64%), Gaps = 10/177 (5%)
 Frame = -3

Query: 566 RKFECHYCFRNFPTSQALGGHQNAHKRERQQAKRA----AMGYDIYPQAHVHGMNYHRFG 399
           R+FECHYC RNFPTSQALGGHQNAHKRERQ AKRA    AM +     AH++G+  +R G
Sbjct: 72  RRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYGLVNYRLG 131

Query: 398 SGSFNSQVTTYNQYP-WNSNSTVYN-RFYGGYGSYNQAQTPPIHGSPLSMWQIP-SVNNV 228
           S       T    YP W S +   N RFYG +GS++Q   PPI+G+PL++W+IP SV   
Sbjct: 132 SAP-----TPPITYPSWGSQAISSNGRFYGSHGSFSQ---PPINGNPLALWRIPASVQTT 183

Query: 227 PRLNHDQYLTTISSPLYPNIDSLQPSGN-ESSSSQNRYVYQSN--NLKDHVSLDLHL 66
           P  + D+  +    PL+   D L+PS +   S+SQ+RYVY+S    ++DHVSLDLHL
Sbjct: 184 PTFSRDR-SSHHPLPLFAG-DDLKPSSHVGGSTSQSRYVYESTKPGVQDHVSLDLHL 238


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score =  144 bits (364), Expect = 8e-33
 Identities = 89/177 (50%), Positives = 115/177 (64%), Gaps = 10/177 (5%)
 Frame = -3

Query: 566 RKFECHYCFRNFPTSQALGGHQNAHKRERQQAKRA----AMGYDIYPQAHVHGMNYHRFG 399
           R+FECHYC RNFPTSQALGGHQNAHKRERQ AKRA    AM +     AH++G+  +R G
Sbjct: 104 RRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYGLVNYRLG 163

Query: 398 SGSFNSQVTTYNQYP-WNSNSTVYN-RFYGGYGSYNQAQTPPIHGSPLSMWQIP-SVNNV 228
           S       T    YP W S +   N RFYG +GS++Q   PPI+G+PL++W+IP SV   
Sbjct: 164 SAP-----TPPITYPSWGSQAISSNGRFYGSHGSFSQ---PPINGNPLALWRIPASVQTT 215

Query: 227 PRLNHDQYLTTISSPLYPNIDSLQPSGN-ESSSSQNRYVYQSN--NLKDHVSLDLHL 66
           P  + D+  +    PL+   D L+PS +   S+SQ+RYVY+S    ++DHVSLDLHL
Sbjct: 216 PTFSRDR-SSHHPLPLFAG-DDLKPSSHVGGSTSQSRYVYESTKPGVQDHVSLDLHL 270


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  140 bits (353), Expect = 1e-31
 Identities = 86/174 (49%), Positives = 114/174 (65%), Gaps = 7/174 (4%)
 Frame = -3

Query: 566 RKFECHYCFRNFPTSQALGGHQNAHKRERQQAKRA----AMGYDIYPQAHVHGMNYHRFG 399
           R+FECHYC RNFPTSQALGGHQNAHKRERQ AKRA    AM ++    AH +G+  +R  
Sbjct: 72  RRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMIHNSLSDAHYYGILNYRID 131

Query: 398 SGSFNSQVTTYNQYP-WNSNSTVYNRFYGGYGSYNQAQTPPIHGSPLSMWQIPSVNNVPR 222
           S S     T    +P WNS+++  NR+YGG GSY+Q    PI+GSPL +W+IP+V+    
Sbjct: 132 SIS-----TAAMTHPSWNSHTST-NRYYGGQGSYSQ---QPINGSPLGLWRIPAVHGSAT 182

Query: 221 LNH-DQYLTTISSPLYPNIDSLQPSGNESSSSQNRYVYQS-NNLKDHVSLDLHL 66
           L H D+ +  + S    + + L+PS    SSS  RY Y+S ++++D VSLDLHL
Sbjct: 183 LQHPDRSVHPLPS---FSGEGLKPSPAGGSSSHGRYGYESKSSVQDRVSLDLHL 233


>ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|222855265|gb|EEE92812.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  135 bits (341), Expect = 4e-30
 Identities = 82/169 (48%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = -3

Query: 566 RKFECHYCFRNFPTSQALGGHQNAHKRERQQAKRAAMGYDIYPQAHVHGMNYHRFGSGSF 387
           R+FECHYC RNFPTSQALGGHQNAHKRERQ AKRA +  D  P                 
Sbjct: 72  RRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQIDSTP----------------- 114

Query: 386 NSQVTTYNQYPWNSNSTVYNRFYGGYGSYNQAQTPPIHGSPLSMWQIPSVNNVPRLNHDQ 207
            S   TY    WNS+S   +RFYG +GSY+Q    PI+GSPL +W+IP+V+     +H  
Sbjct: 115 -SSAMTYPS--WNSHSNT-SRFYGSHGSYSQ---QPINGSPLGLWRIPAVHGGGTFHHSD 167

Query: 206 YLTTISSPLYPNIDSLQPS-GNESSSSQNRYVYQSN-NLKDHVSLDLHL 66
                  PL+   + L+PS     SSSQ RY Y S  + +DHVSLDLHL
Sbjct: 168 RSMHHPLPLFAG-EELKPSPAGTGSSSQGRYGYDSKPSAQDHVSLDLHL 215


Top