BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046790
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   109   3e-22
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   108   5e-22
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...   107   1e-21
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...   104   7e-21

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = +2

Query: 5   SVLMSMQVYWSSVFILPVSVSNAIEKLIRNFIWGGTGMVQGRSKVAWHDVCMPKTEGGLG 184
           SVL S+QVYW+S+F+LP  V   +E+++++F+W G+ M    +KVAW  VC+PK EGGLG
Sbjct: 103 SVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLG 162

Query: 185 IRPLRTWNKTLMAFHIWSILTNRD-SLWVKWIHTYRLRGRNFWQIKPAWDASISW 346
           I+ ++ WNK  +  HIW++  + D S+W  WI +  LRGRNFW IK   + S +W
Sbjct: 163 IKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAW 217


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/115 (46%), Positives = 65/115 (56%)
 Frame = +2

Query: 5    SVLMSMQVYWSSVFILPVSVSNAIEKLIRNFIWGGTGMVQGRSKVAWHDVCMPKTEGGLG 184
            SV+ S   +W S FILP      IE++   F+WG     +G  KV+W + C+PK EGGLG
Sbjct: 808  SVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLG 867

Query: 185  IRPLRTWNKTLMAFHIWSILTNRDSLWVKWIHTYRLRGRNFWQIKPAWDASISWK 349
            +R   TWNKTL    IW +   RDSLWV W H  RLR  NFW  + A   S  WK
Sbjct: 868  LRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWK 922


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/113 (43%), Positives = 71/113 (62%)
 Frame = +2

Query: 8   VLMSMQVYWSSVFILPVSVSNAIEKLIRNFIWGGTGMVQGRSKVAWHDVCMPKTEGGLGI 187
           VL S+QVYW+SVF+LP+ V   ++K++R+++W G    +G +KVAW +VC+P  EGGL I
Sbjct: 269 VLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAI 328

Query: 188 RPLRTWNKTLMAFHIWSILTNRDSLWVKWIHTYRLRGRNFWQIKPAWDASISW 346
               +WNK      +W +L    SLWV W+  Y L+GR+ W+I     A  SW
Sbjct: 329 CDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAG--AGRSW 379


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/104 (45%), Positives = 66/104 (63%)
 Frame = +2

Query: 5   SVLMSMQVYWSSVFILPVSVSNAIEKLIRNFIWGGTGMVQGRSKVAWHDVCMPKTEGGLG 184
           SVL S+QVYW+SVF+LP+ V   + K++R++ W G    +G  KVAW +VC+P  EGGL 
Sbjct: 86  SVLRSLQVYWASVFMLPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLV 145

Query: 185 IRPLRTWNKTLMAFHIWSILTNRDSLWVKWIHTYRLRGRNFWQI 316
           IR   +WN       +W +L    SLWV W+  Y L+GR+ W+I
Sbjct: 146 IRDRSSWNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEI 189


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   SVLMSMQVYWSSVFILPVSVSNAIEKLIRNFIWGGTGMVQGRSKVAWHDVCMPKTEGGLG 184
           SVLMS+  +WSS F LP +    IE+L   F+W G  +    +K+AW  VC+P  EGGLG
Sbjct: 40  SVLMSITNFWSSAFRLPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGLG 99

Query: 185 IRPLRTWNKTLMAFHIWSILTNRDSLWVKWIHTYRLRGRNFWQIK-PAWDASISWK 349
           +RPL+  N       IW +L ++ SLW +W+ TY +R  NFW IK  ++  S  W+
Sbjct: 100 LRPLKEINTVCGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAIKASSYQGSWMWR 155