BLASTX nr result

ID: Cnidium21_contig00046772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046772
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    95   7e-18
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    94   9e-18
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    79   3e-13
ref|XP_002520641.1| conserved hypothetical protein [Ricinus comm...    75   7e-12

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  117 bits (293), Expect = 1e-24
 Identities = 47/105 (44%), Positives = 73/105 (69%)
 Frame = +1

Query: 4   RWDFDIIQDVFQARDAELVKRIPLPLSDTIDSWFWILDEKGDYTVKSGYRWLQGELENVD 183
           RWD DI+ D+F  RD  L++ IPL   +  DSW+W+ D+KG+Y VK+ YR LQG+L   +
Sbjct: 365 RWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRPE 424

Query: 184 KWYWTKLWSLKLPGKVTNFLWRVCTSCLPTASALVLKHVEMNVLC 318
             +W K W LK+P KV N +W++C++C+ TA  L +++V+++ LC
Sbjct: 425 TSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLC 469


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
 Frame = +1

Query: 7   WDFDIIQDVFQARDAELVKRIPLPLSDTIDSWFWILDEKGDYTVKSGYRWLQGELENV-- 180
           W  D I+D F ARDA+L+  IPLP+S   D   W  D +G+YT +SGY  L+   ++   
Sbjct: 438 WREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTAL 497

Query: 181 ------DKWYWTKLWSLKLPGKVTNFLWRVCTSCLPTASALVLKHVEMNVLCP 321
                   + W +LW +  P K+ NF WR   +CLPT  AL ++HV+  + CP
Sbjct: 498 VASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCP 550


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
 Frame = +1

Query: 7    WDFDIIQDVFQARDAELVKRIPLPLSDTIDSWFWILDEKGDYTVKSGYRWLQGELENV-- 180
            W  D I+D F ARDA+L+  IPLP+S   D   W  D +G+YT +SGY  L+   ++   
Sbjct: 1168 WREDFIRDKFMARDADLILYIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAAL 1227

Query: 181  ------DKWYWTKLWSLKLPGKVTNFLWRVCTSCLPTASALVLKHVEMNVLCP 321
                    + W +LW +  P K+ NF WR   +CLPT  AL ++HV+  + CP
Sbjct: 1228 VASDVDSNFVWAQLWKVTTPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCP 1280


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
 Frame = +1

Query: 7    WDFDIIQDVFQARDAELVKRIPLPLSDTIDSWFWILDEKGDYTVKSGYRWLQGELENV-- 180
            W  D I+D F  RDA+L+  IPLP+S   D   W  D +G+YT +SGY  L+   ++   
Sbjct: 1525 WHEDFIRDKFMGRDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAAL 1584

Query: 181  ------DKWYWTKLWSLKLPGKVTNFLWRVCTSCLP 270
                    + W +LW +  P K+ NF WRV  +CLP
Sbjct: 1585 VASDVDSNFVWAQLWKVTTPPKILNFAWRVARNCLP 1620


>ref|XP_002520641.1| conserved hypothetical protein [Ricinus communis]
           gi|223540161|gb|EEF41737.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +1

Query: 4   RWDFDIIQDVFQARDAELVKRIPLPLSDTIDSWFWILDEKGDYTVKSGYRWLQGELENVD 183
           RW+ D+I+++F   DA L+  IPL     +D  FW+++ KGD+TVKS YR L G+     
Sbjct: 7   RWNRDLIENIFNQHDASLILHIPLSNRQVVDRLFWVVNPKGDFTVKSCYRLLCGDFHRHA 66

Query: 184 KWYWTKLWSLKLPGKVTNFL 243
              W +LW L +P +V N +
Sbjct: 67  HPLWNRLWKLPIPYRVCNLI 86


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