BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046749
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm...   113   1e-23
ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_002314145.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21

>ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed
           protein product [Vitis vinifera]
          Length = 252

 Score =  115 bits (287), Expect = 5e-24
 Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   VRNLIKIPNVTNPVFSPTPLQI-SNKTLNLSDYLSRNYHDGRPRGSLWRGKKLIGKEAIF 179
           +++LIK P   +  F    L++ SNK L    +  ++YHDGRPRG LWRGKKLIGKEA+F
Sbjct: 19  LQSLIKSPIKESTKFQFPVLEVASNKPL----FGLKHYHDGRPRGPLWRGKKLIGKEALF 74

Query: 180 VILGLKRFKDDEEKLGKFIKTHVLRLLKMDMVAV 281
           VILGLKRFKDDEEKL KFIK+HVLRLLKMDM+AV
Sbjct: 75  VILGLKRFKDDEEKLRKFIKSHVLRLLKMDMIAV 108


>ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis]
           gi|223543626|gb|EEF45155.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 12/103 (11%)
 Frame = +3

Query: 9   NLIKIPNVTNPVFSPTPLQISNKTLNLSDYLS------------RNYHDGRPRGSLWRGK 152
           +++ + N+TN     T L  +++ L   + L+            R YHDGRPRG LWRGK
Sbjct: 12  SVVLLQNLTNKPIKQTQLPPNSQALFDLNILNKHNHSHNSFSGLRQYHDGRPRGPLWRGK 71

Query: 153 KLIGKEAIFVILGLKRFKDDEEKLGKFIKTHVLRLLKMDMVAV 281
           KLIGKEA+FVILGLKRFKD+EEKL KFIKTHVLRLLKMDM+AV
Sbjct: 72  KLIGKEALFVILGLKRFKDEEEKLDKFIKTHVLRLLKMDMIAV 114


>ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           isoform 1 [Vitis vinifera]
           gi|359478900|ref|XP_003632183.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46870
           isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3|
           unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/93 (65%), Positives = 70/93 (75%)
 Frame = +3

Query: 3   VRNLIKIPNVTNPVFSPTPLQISNKTLNLSDYLSRNYHDGRPRGSLWRGKKLIGKEAIFV 182
           ++NLIK P   +  F    L++ +    L    S+ YHDGRPRG LWRGKKLIGKEA+FV
Sbjct: 19  LQNLIKAPIKESTRFQFPVLEVGSYKPLLG---SKLYHDGRPRGPLWRGKKLIGKEALFV 75

Query: 183 ILGLKRFKDDEEKLGKFIKTHVLRLLKMDMVAV 281
           ILGLKRFKDDEE L KFIK+HVLRLLKMDMVAV
Sbjct: 76  ILGLKRFKDDEENLRKFIKSHVLRLLKMDMVAV 108


>ref|XP_002314145.1| predicted protein [Populus trichocarpa] gi|222850553|gb|EEE88100.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 7/97 (7%)
 Frame = +3

Query: 12  LIKIPNVTNP--VFSPTPLQISNKTLNLSDYLS----RNYHDGRPRGSLWRGKKLIGKEA 173
           ++ + N+T    +   T L +S K  N+  +L     R YHDGRPRG LWRGKKLIGKEA
Sbjct: 18  IVILQNLTTKQSIIDQTQLPLS-KASNIQSFLVPAGLRQYHDGRPRGPLWRGKKLIGKEA 76

Query: 174 IFVILGLKRFK-DDEEKLGKFIKTHVLRLLKMDMVAV 281
           +FVILGLKRFK DD+EKL +FIKTHV RLLK+DM+AV
Sbjct: 77  LFVILGLKRFKNDDDEKLDRFIKTHVFRLLKLDMIAV 113


>ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Glycine max]
          Length = 255

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/59 (83%), Positives = 53/59 (89%)
 Frame = +3

Query: 105 RNYHDGRPRGSLWRGKKLIGKEAIFVILGLKRFKDDEEKLGKFIKTHVLRLLKMDMVAV 281
           R YHDGRPRG LW+GKKLIGKEA+FVI G KRF DDE+KL KFIKTHVLRLLKMDM+AV
Sbjct: 53  RQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMDMIAV 111