BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046738
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica...    69   3e-10
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g...    69   3e-10
gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   3e-10
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   4e-10
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   4e-10

>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 971

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/95 (38%), Positives = 54/95 (56%)
 Frame = +1

Query: 61   EDVIRPHEDPLVINPIIGENKIWRVLVDGGSSVNIIYHRTYCKMNLGGEHLEPCHEAPLY 240
            E V+ PH+DPLVI+  I   ++WR+LVDGGSS ++I+   Y KM L  + L P   A + 
Sbjct: 723  EGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPA-PASIR 781

Query: 241  GFGNQPVPIEGTITLPVVLGKAPYTVQKEAKFYVV 345
            GFG + V + G   L +  G      +++  F VV
Sbjct: 782  GFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVV 816


>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
           gi|113548927|dbj|BAF12370.1| Os03g0439900, partial
           [Oryza sativa Japonica Group]
          Length = 420

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/95 (38%), Positives = 54/95 (56%)
 Frame = +1

Query: 61  EDVIRPHEDPLVINPIIGENKIWRVLVDGGSSVNIIYHRTYCKMNLGGEHLEPCHEAPLY 240
           E V+ PH+DPLVI+  I   ++WR+LVDGGSS ++I+   Y KM L  + L P   A + 
Sbjct: 172 EGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPA-PASIR 230

Query: 241 GFGNQPVPIEGTITLPVVLGKAPYTVQKEAKFYVV 345
           GFG + V + G   L +  G      +++  F VV
Sbjct: 231 GFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVV 265


>gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 406

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/95 (38%), Positives = 54/95 (56%)
 Frame = +1

Query: 61  EDVIRPHEDPLVINPIIGENKIWRVLVDGGSSVNIIYHRTYCKMNLGGEHLEPCHEAPLY 240
           E V+ PH+DPLVI+  I   ++WR+LVDGGSS ++I+   Y KM L  + L P   A + 
Sbjct: 158 EGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPA-PASIR 216

Query: 241 GFGNQPVPIEGTITLPVVLGKAPYTVQKEAKFYVV 345
           GFG + V + G   L +  G      +++  F VV
Sbjct: 217 GFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVV 251


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/95 (38%), Positives = 57/95 (60%)
 Frame = +1

Query: 61   EDVIRPHEDPLVINPIIGENKIWRVLVDGGSSVNIIYHRTYCKMNLGGEHLEPCHEAPLY 240
            E ++ PH+DPLV++  I + ++ RVL+DGGSS +++++  + KM +  + L      PL 
Sbjct: 745  EGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNA-GVPLQ 803

Query: 241  GFGNQPVPIEGTITLPVVLGKAPYTVQKEAKFYVV 345
            GFG Q V   G I+L VV GK     ++E  F VV
Sbjct: 804  GFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVV 838


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/95 (38%), Positives = 57/95 (60%)
 Frame = +1

Query: 61   EDVIRPHEDPLVINPIIGENKIWRVLVDGGSSVNIIYHRTYCKMNLGGEHLEPCHEAPLY 240
            E ++ PH+DPLV++  I + ++ RVL+DGGSS +++++  + KM +  + L      PL 
Sbjct: 745  EGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNA-GVPLQ 803

Query: 241  GFGNQPVPIEGTITLPVVLGKAPYTVQKEAKFYVV 345
            GFG Q V   G I+L VV GK     ++E  F VV
Sbjct: 804  GFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVV 838