BLASTX nr result

ID: Cnidium21_contig00046727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046727
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37702.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [V...   187   6e-46
ref|XP_002514381.1| voltage-gated clc-type chloride channel, put...   170   1e-40
ref|XP_003567037.1| PREDICTED: chloride channel protein CLC-e-li...   167   1e-39
ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride cha...   165   3e-39

>emb|CBI37702.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  187 bits (476), Expect = 6e-46
 Identities = 90/130 (69%), Positives = 105/130 (80%)
 Frame = +1

Query: 52  GNTATIISACFVGLLTGISVVIFNNVVHEIRDLCWDGIPYRGASWLREEPTGLVWKKIVL 231
           GN A I+S+CFVGLLTGI +V+FNN VH IRD  WDGIPYRGASWLREEP   +W++++L
Sbjct: 5   GNLA-ILSSCFVGLLTGIGIVLFNNAVHVIRDFSWDGIPYRGASWLREEPIEAIWERVIL 63

Query: 232 VPACGGLVVGMLNYIRGALNIPVEGVLTSRIKDVLEPILRTVAACVTLGTGNSLGPEGPS 411
           VP CGGL+V  LN +R AL  P +G L S IK  L+P L+ VAACVTLGTGNSLGPEGPS
Sbjct: 64  VPLCGGLLVSGLNVLRDALQSPGDGNLISNIKAALQPFLKAVAACVTLGTGNSLGPEGPS 123

Query: 412 VEIGSSIAKG 441
           VEIG+SIAKG
Sbjct: 124 VEIGASIAKG 133


>ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [Vitis vinifera]
           gi|301318140|gb|ADK66985.1| chloride channel ClC7 [Vitis
           vinifera]
          Length = 733

 Score =  187 bits (476), Expect = 6e-46
 Identities = 90/130 (69%), Positives = 105/130 (80%)
 Frame = +1

Query: 52  GNTATIISACFVGLLTGISVVIFNNVVHEIRDLCWDGIPYRGASWLREEPTGLVWKKIVL 231
           GN A I+S+CFVGLLTGI +V+FNN VH IRD  WDGIPYRGASWLREEP   +W++++L
Sbjct: 85  GNLA-ILSSCFVGLLTGIGIVLFNNAVHVIRDFSWDGIPYRGASWLREEPIEAIWERVIL 143

Query: 232 VPACGGLVVGMLNYIRGALNIPVEGVLTSRIKDVLEPILRTVAACVTLGTGNSLGPEGPS 411
           VP CGGL+V  LN +R AL  P +G L S IK  L+P L+ VAACVTLGTGNSLGPEGPS
Sbjct: 144 VPLCGGLLVSGLNVLRDALQSPGDGNLISNIKAALQPFLKAVAACVTLGTGNSLGPEGPS 203

Query: 412 VEIGSSIAKG 441
           VEIG+SIAKG
Sbjct: 204 VEIGASIAKG 213


>ref|XP_002514381.1| voltage-gated clc-type chloride channel, putative [Ricinus
           communis] gi|223546478|gb|EEF47977.1| voltage-gated
           clc-type chloride channel, putative [Ricinus communis]
          Length = 759

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/132 (62%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = +1

Query: 52  GNTATIISACFVGLLTGISVVIFNNVVHEIRDLCWDGIPYRGASWLREEPTGLVWKKIVL 231
           GN   I+S+C +G+LTG++VV+FNN VHEIRD+ WDGIPYRGASWLREEP   +W +++ 
Sbjct: 88  GNYGIIVSSCVIGILTGLAVVVFNNGVHEIRDIFWDGIPYRGASWLREEPLDSIWIRVIF 147

Query: 232 VPACGGLVVGMLNYIRGALNIPVEGVLTSR--IKDVLEPILRTVAACVTLGTGNSLGPEG 405
           VPACGGL+V  LN IR  ++        S      VL P L++VAAC TLGTGNSLGPEG
Sbjct: 148 VPACGGLIVSFLNTIRSLIHDNNNNNNNSNHPFLAVLSPFLKSVAACFTLGTGNSLGPEG 207

Query: 406 PSVEIGSSIAKG 441
           PSVEIGSSIAKG
Sbjct: 208 PSVEIGSSIAKG 219


>ref|XP_003567037.1| PREDICTED: chloride channel protein CLC-e-like [Brachypodium
           distachyon]
          Length = 714

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/130 (61%), Positives = 98/130 (75%)
 Frame = +1

Query: 52  GNTATIISACFVGLLTGISVVIFNNVVHEIRDLCWDGIPYRGASWLREEPTGLVWKKIVL 231
           G     ++AC VGLLTG+SVV+FN  VHEIRDL WDGIP RGASWLREEPTG +W++++ 
Sbjct: 72  GRDLVTLAACLVGLLTGVSVVLFNLSVHEIRDLLWDGIPLRGASWLREEPTGEIWQRVIF 131

Query: 232 VPACGGLVVGMLNYIRGALNIPVEGVLTSRIKDVLEPILRTVAACVTLGTGNSLGPEGPS 411
           VP  GG++VG LN +R ++    +G + SRI  V  P L+  AA  TLGTGNSLGPEGPS
Sbjct: 132 VPVSGGIIVGGLNALRNSIKSNSDGTV-SRIMGVFRPFLKAAAASFTLGTGNSLGPEGPS 190

Query: 412 VEIGSSIAKG 441
           VEIGS+IAKG
Sbjct: 191 VEIGSAIAKG 200


>ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride channel protein CLC-e-like
           [Cucumis sativus]
          Length = 779

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/142 (57%), Positives = 105/142 (73%), Gaps = 14/142 (9%)
 Frame = +1

Query: 58  TATIISACFVGLLTGISVVIFNNVVHEIRDLCWDGIPYRGASWLREEPTGLVWKKIVLVP 237
           ++TIIS+CFVGLLTGI VV+FNN VHEIRD  WDGIP RGASWLRE P   +WK+++LVP
Sbjct: 126 SSTIISSCFVGLLTGIGVVLFNNAVHEIRDFSWDGIPNRGASWLREMPIEDIWKRVILVP 185

Query: 238 ACGGLVVGMLNYIRGALNIPVE-----------GV---LTSRIKDVLEPILRTVAACVTL 375
           A GG +V  LN +R A ++ V+           GV   +++++K  L+P L+ +AA VTL
Sbjct: 186 ASGGFLVSFLNLLRDATDVKVDQPQGDDPSTKFGVPISISNKLKAALQPFLKAIAASVTL 245

Query: 376 GTGNSLGPEGPSVEIGSSIAKG 441
           GTGNSLGPEGPSV+IG+S+ KG
Sbjct: 246 GTGNSLGPEGPSVDIGTSVGKG 267


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