BLASTX nr result

ID: Cnidium21_contig00046695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046695
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39089.3| unnamed protein product [Vitis vinifera]               60   6e-09
ref|XP_002266912.1| PREDICTED: uncharacterized protein LOC100261...    55   1e-07
ref|XP_003521513.1| PREDICTED: uncharacterized protein LOC100806...    57   4e-07
ref|XP_002871222.1| hypothetical protein ARALYDRAFT_487469 [Arab...    55   1e-06
ref|XP_002524118.1| conserved hypothetical protein [Ricinus comm...    52   6e-06

>emb|CBI39089.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 59.7 bits (143), Expect(2) = 6e-09
 Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
 Frame = +1

Query: 1   RLLSFGYSPESETGQVDEDKE--------DCFLEDSPPRSSLQAIQDDYLFDDSMSLQNL 156
           RL  +GY P       D++          D  + DS   S  +   +D L D+S+SL+NL
Sbjct: 96  RLRDYGYVPNLVIDDDDDEASGLPTPLGLDSRISDSATDSIGKKFDEDPLSDESLSLKNL 155

Query: 157 GLSDACLATIASQA----NNSIQMEEEYQASTKLFELTA----DDLESCEVSRSLITVSQ 312
           GLS+ CLAT+AS+     +    +E   Q++TK+    A    DDL S    +S+I VS+
Sbjct: 156 GLSEVCLATLASEGQLYEDKLHNVEGLSQSATKILGSIAGEVGDDLNSVGAPKSVINVSK 215

Query: 313 DDYASL 330
           +DY  L
Sbjct: 216 NDYEQL 221



 Score = 25.4 bits (54), Expect(2) = 6e-09
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 333 SYMKILVSWED 365
           SYMK LVSWED
Sbjct: 223 SYMKTLVSWED 233


>ref|XP_002266912.1| PREDICTED: uncharacterized protein LOC100261551 [Vitis vinifera]
          Length = 269

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
 Frame = +1

Query: 1   RLLSFGYSPESETGQVDEDKE--------DCFLEDSPPRSSLQAIQDDYLFDDSMSLQNL 156
           RL  +GY P       D++          D  + DS   S  +   +D L D+S+SL+NL
Sbjct: 96  RLRDYGYVPNLVIDDDDDEASGLPTPLGLDSRISDSATDSIGKKFDEDPLSDESLSLKNL 155

Query: 157 GLSDACLATIASQANNSIQMEEEYQASTKLFELTADDLESCEVSRSLITVSQDDYASL 330
           GLS+ CLAT+AS+                      DDL S    +S+I VS++DY  L
Sbjct: 156 GLSEVCLATLASEGE------------------VGDDLNSVGAPKSVINVSKNDYEQL 195



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 333 SYMKILVSWED 365
           SYMK LVSWED
Sbjct: 197 SYMKTLVSWED 207


>ref|XP_003521513.1| PREDICTED: uncharacterized protein LOC100806270 [Glycine max]
          Length = 309

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
 Frame = +1

Query: 1   RLLSFGYSPESETGQVDE-------DKEDCFLEDSPPR---------SSLQAIQDDYLFD 132
           RL S+GYS  S+  + DE       D ED    DSP           SS +++++D L D
Sbjct: 97  RLQSYGYSAVSDIEEEDEAEDIQHQDPEDKL--DSPSSFYGSLSVADSSFKSLEEDALLD 154

Query: 133 DSMSLQNLGLSDACLATIASQANNSIQMEEEYQASTKLFELTAD--------------DL 270
           +S+SL+N GLSD CLA +AS+ + S Q  E+ Q   +  +  AD              ++
Sbjct: 155 ESLSLKNFGLSDTCLAMLASKGDLSPQEPEKVQEFKQQHQHDADTEGSNFLSDEQDKENI 214

Query: 271 ESCEVSRSLITVSQDDYASL 330
           +S E  R ++ + + ++  L
Sbjct: 215 KSAEAPRPILKILKSEFECL 234



 Score = 22.3 bits (46), Expect(2) = 4e-07
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 321 CKPSSYMKILVSWED 365
           C P+ YMK L SWED
Sbjct: 233 CLPA-YMKGLTSWED 246


>ref|XP_002871222.1| hypothetical protein ARALYDRAFT_487469 [Arabidopsis lyrata subsp.
           lyrata] gi|297317059|gb|EFH47481.1| hypothetical protein
           ARALYDRAFT_487469 [Arabidopsis lyrata subsp. lyrata]
          Length = 315

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 33/143 (23%)
 Frame = +1

Query: 1   RLLSFGYSPESETGQVDEDKEDCF----LEDSPPRS------SLQA-----IQDDYLFDD 135
           RL  FGY PE E  +   DKE  F     EDS   +      SLQ      + +D L D+
Sbjct: 96  RLTDFGYVPEIEIDEGRGDKESGFGAFGHEDSKHSNDDLNSYSLQCSIKKGLDEDNLLDN 155

Query: 136 SMSLQNLGLSDACLATIASQANNSIQ-----MEEEYQA---------STKLFELTADD-- 267
           S++L+NLGLSDACLA +A++ N++++     ++E  ++         + K  EL+ +D  
Sbjct: 156 SLNLKNLGLSDACLAYLATEVNDNVKDPDTSLKESVKSKPFDTSALPAPKASELSNEDEY 215

Query: 268 --LESCEVSRSLITVSQDDYASL 330
             LE    S   +T+ +++Y SL
Sbjct: 216 ATLEMDRTSGPTLTLIKEEYDSL 238



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 333 SYMKILVSWED 365
           S+MK L SWED
Sbjct: 240 SFMKSLASWED 250


>ref|XP_002524118.1| conserved hypothetical protein [Ricinus communis]
           gi|223536686|gb|EEF38328.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 45/154 (29%)
 Frame = +1

Query: 4   LLSFGYSPESETGQVDEDKE---DCFLEDS--------PPRSSLQAIQDDYLFDDSMSLQ 150
           L+SFGY P  +    +E++E   D   +D            S+++++Q+D L DDS+SL+
Sbjct: 97  LISFGYVPPPDIDDDEEEEEESTDVKTKDGLDFPSCNGSVSSAIKSLQEDPLLDDSLSLK 156

Query: 151 NLGLSDACLATIAS-----------QANNSIQMEEEY-------------------QAST 240
           +LGLSD CLAT+ +            AN+ I   + +                   Q S 
Sbjct: 157 SLGLSDVCLATLEAFLVFLTNIIFCAANSKIHSPDLFTRESMKDYGDKIYSIRSLDQISA 216

Query: 241 KLFELT----ADDLESCEVSRSLITVSQDDYASL 330
           K   +T     +DL+  E  R  + VS+DDY  L
Sbjct: 217 KTLGVTKGEMENDLKPSEDVRPFVEVSKDDYDGL 250



 Score = 22.3 bits (46), Expect(2) = 6e-06
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 333 SYMKILVSWED 365
           SYMK L +WED
Sbjct: 252 SYMKSLTTWED 262


Top