BLASTX nr result
ID: Cnidium21_contig00046690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00046690
(381 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containi... 185 3e-45
emb|CBI18900.3| unnamed protein product [Vitis vinifera] 185 3e-45
emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera] 183 1e-44
ref|XP_003599110.1| Pentatricopeptide repeat-containing protein ... 174 9e-42
ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containi... 173 1e-41
>ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 185 bits (470), Expect = 3e-45
Identities = 88/122 (72%), Positives = 104/122 (85%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
GF+ D+ I T L+++Y K GRL A+ ++F +K+ DRIAWTA+LAGYA+H GREAI+LF
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSCVYSVEPRLDHYSCMVDLLGR 367
D+MV +G E DHVTFTHLLSACSHSGLVEEGK+YFEIMS VY VEPRLDHYSCMVDLLGR
Sbjct: 412 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 471
Query: 368 SG 373
SG
Sbjct: 472 SG 473
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
G ++ +L+++Y K G L AA ++F M ++W +++ + +GY + ++LF
Sbjct: 251 GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 310
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGL 268
++M G PD T LL AC+ +GL
Sbjct: 311 NLMKRAGINPDQATMVALLRACTDTGL 337
>emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 185 bits (470), Expect = 3e-45
Identities = 88/122 (72%), Positives = 104/122 (85%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
GF+ D+ I T L+++Y K GRL A+ ++F +K+ DRIAWTA+LAGYA+H GREAI+LF
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSCVYSVEPRLDHYSCMVDLLGR 367
D+MV +G E DHVTFTHLLSACSHSGLVEEGK+YFEIMS VY VEPRLDHYSCMVDLLGR
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 414
Query: 368 SG 373
SG
Sbjct: 415 SG 416
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
G ++ +L+++Y K G L AA ++F M ++W +++ + +GY + ++LF
Sbjct: 194 GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 253
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGL 268
++M G PD T LL AC+ +GL
Sbjct: 254 NLMKRAGINPDQATMVALLRACTDTGL 280
>emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 183 bits (464), Expect = 1e-44
Identities = 87/122 (71%), Positives = 103/122 (84%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
GF+ D+ I T L+++Y K GRL A+ ++F +K+ D IAWTA+LAGYA+H GREAI+LF
Sbjct: 372 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF 431
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSCVYSVEPRLDHYSCMVDLLGR 367
D+MV +G E DHVTFTHLLSACSHSGLVEEGK+YFEIMS VY VEPRLDHYSCMVDLLGR
Sbjct: 432 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 491
Query: 368 SG 373
SG
Sbjct: 492 SG 493
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
G ++ +L+++Y K G L AA ++F M ++W +++ + +GY + ++LF
Sbjct: 271 GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 330
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGL 268
++M G PD T LL AC+ +GL
Sbjct: 331 NLMKRAGINPDQATMVALLRACTDTGL 357
>ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 623
Score = 174 bits (440), Expect = 9e-42
Identities = 81/125 (64%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
Frame = +2
Query: 2 TAGFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIE 181
T G D+++TI+TTL+++Y+K GRL + +VF + +PD++AWTA+LAGYA+HG G+EAIE
Sbjct: 278 TCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIE 337
Query: 182 LFDVMV-SKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSCVYSVEPRLDHYSCMVDL 358
F+ +V +G EPDHVTFTHLLSACSHSGLV+EGK +F +MS VY V+PRLDHYSCMVDL
Sbjct: 338 FFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDL 397
Query: 359 LGRSG 373
LGR G
Sbjct: 398 LGRCG 402
>ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 173 bits (438), Expect = 1e-41
Identities = 82/122 (67%), Positives = 95/122 (77%)
Frame = +2
Query: 8 GFDKDVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELF 187
GF +TI T L+ Y K GRL A++ VF + DR+AWTA+LAGYA HG GREAI+LF
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327
Query: 188 DVMVSKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSCVYSVEPRLDHYSCMVDLLGR 367
+ M +KG EPDHVTFTHLLSACSHSGLV EGK YF +MS VY +EPR+DHYSCMVDLLGR
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGR 387
Query: 368 SG 373
G
Sbjct: 388 CG 389
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/96 (31%), Positives = 53/96 (55%)
Frame = +2
Query: 20 DVTIMTTLVSVYTKSGRLCAAHEVFRGMKEPDRIAWTAVLAGYALHGYGREAIELFDVMV 199
+V + +L+++Y KSG L +A +F + +P+ ++W +++A +G RE I+ F+ M
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 200 SKGAEPDHVTFTHLLSACSHSGLVEEGKRYFEIMSC 307
G E D T LL AC H G+ + + +M C
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFC 266