BLASTX nr result

ID: Cnidium21_contig00046689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046689
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    60   3e-07
ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257...    60   4e-07
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    51   9e-07
ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810...    52   2e-06
emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]    57   3e-06

>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
 Frame = +1

Query: 49  QSPPSTQFSVIVGNGQNLKCVGQCSDVKFTIQG---VIDLH-----GADLVLGVAWQEAL 204
           Q   ++   V VGNG+ L+C   C +V   IQ    ++D H     GAD+VLGV W ++L
Sbjct: 449 QPQTTSTLRVTVGNGEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSL 508

Query: 205 GEI*INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQRDEVSQFFMILLHI- 381
           G +  ++    +KFI + K + L+G+   + I+ IS S L +       S +F I L   
Sbjct: 509 GPVLTDYATLTMKFIYNDKLIELKGDRDAN-IDQISPSQLRRLMNTGNTSTYFHIQLDSH 567

Query: 382 ------LFHVIQSRQVVIKLYT 429
                 L H I + Q ++  Y+
Sbjct: 568 HPEPLPLTHSIPAIQTLLTKYS 589


>ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
          Length = 787

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
 Frame = +1

Query: 58  PSTQFSVIVGNGQNLKCVGQCSDVKFTIQGV--------IDLHGADLVLGVAWQEALGEI 213
           P+  F V V NG+ LKC G+   V+  +QG         + L G DLVLGV W E LG +
Sbjct: 370 PTETFPVWVANGERLKCQGRYDKVRVELQGTEFYLTLFSLPLSGLDLVLGVQWLEMLGSV 429

Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQR 342
             N+++  + FI + ++  LQG   +++    S   L +F QR
Sbjct: 430 VCNWKQLTMDFIWENQDRRLQGVDVQTIQSASSEEILKEFRQR 472


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 50.8 bits (120), Expect(2) = 9e-07
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
 Frame = +1

Query: 58  PSTQFSVIVGNGQNLKCVGQCSDVKFTIQG--------VIDLHGADLVLGVAWQEALGEI 213
           P+    V+VGNG  L C   C D   ++Q         ++ + GAD++LG+ W + LG I
Sbjct: 388 PTNPLRVLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPI 447

Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQRDEVSQFF 363
             ++    +KF   G+ V L  +       PISA+ + +  Q +  S  F
Sbjct: 448 TTDYTSLIMKFHHLGQPVELHVDADHG-PHPISATQIKRMIQTNATSALF 496



 Score = 27.7 bits (60), Expect(2) = 9e-07
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 3   SHNFIQTRVAKFLGLTITPVNSI 71
           +HNF+Q R+A FL L   P N +
Sbjct: 370 THNFLQPRLATFLHLPTVPTNPL 392


>ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
          Length = 1273

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
 Frame = +1

Query: 58  PSTQFSVIVGNGQNLKCVGQCSDVKFTIQG--------VIDLHGADLVLGVAWQEALGEI 213
           PS  F V+V NG  +  +G   ++    QG        ++ + GADL+LG  W + LG  
Sbjct: 353 PSPLFKVMVDNGNYMTPIGMIRELSIQAQGNRFQLPVFLLPISGADLILGAIWLKTLGSH 412

Query: 214 *INFQKSYLKFILDGKEVCLQGN 282
             ++    +KF+ DGK + LQG+
Sbjct: 413 IADYDSLQIKFLHDGKFITLQGD 435



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 3   SHNFIQTRVAKFLGLTITP 59
           S NF+Q RVAKF  L I P
Sbjct: 335 SDNFLQPRVAKFFKLPIEP 353


>emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
          Length = 522

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
 Frame = +1

Query: 58  PSTQFSVIVGNGQNLKCVGQCSDVKFTIQGV--------IDLHGADLVLGVAWQEALGEI 213
           P+  F V V NGQ LKC G+  ++   +QG+        + L+G DLVLGV W E LG +
Sbjct: 358 PTAPFHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLEQLGSV 417

Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSL 297
             ++++  ++F    K   LQG+ +++L
Sbjct: 418 VCDWKQMTMEFQWANKPRLLQGSRAQNL 445


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