BLASTX nr result
ID: Cnidium21_contig00046689
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00046689 (681 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615... 60 3e-07 ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257... 60 4e-07 ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788... 51 9e-07 ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810... 52 2e-06 emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera] 57 3e-06 >gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1| retrotransposon protein [Glycine max] Length = 1261 Score = 60.5 bits (145), Expect = 3e-07 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 15/142 (10%) Frame = +1 Query: 49 QSPPSTQFSVIVGNGQNLKCVGQCSDVKFTIQG---VIDLH-----GADLVLGVAWQEAL 204 Q ++ V VGNG+ L+C C +V IQ ++D H GAD+VLGV W ++L Sbjct: 449 QPQTTSTLRVTVGNGEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSL 508 Query: 205 GEI*INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQRDEVSQFFMILLHI- 381 G + ++ +KFI + K + L+G+ + I+ IS S L + S +F I L Sbjct: 509 GPVLTDYATLTMKFIYNDKLIELKGDRDAN-IDQISPSQLRRLMNTGNTSTYFHIQLDSH 567 Query: 382 ------LFHVIQSRQVVIKLYT 429 L H I + Q ++ Y+ Sbjct: 568 HPEPLPLTHSIPAIQTLLTKYS 589 >ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera] Length = 787 Score = 60.1 bits (144), Expect = 4e-07 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 8/103 (7%) Frame = +1 Query: 58 PSTQFSVIVGNGQNLKCVGQCSDVKFTIQGV--------IDLHGADLVLGVAWQEALGEI 213 P+ F V V NG+ LKC G+ V+ +QG + L G DLVLGV W E LG + Sbjct: 370 PTETFPVWVANGERLKCQGRYDKVRVELQGTEFYLTLFSLPLSGLDLVLGVQWLEMLGSV 429 Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQR 342 N+++ + FI + ++ LQG +++ S L +F QR Sbjct: 430 VCNWKQLTMDFIWENQDRRLQGVDVQTIQSASSEEILKEFRQR 472 >ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max] Length = 1433 Score = 50.8 bits (120), Expect(2) = 9e-07 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 8/110 (7%) Frame = +1 Query: 58 PSTQFSVIVGNGQNLKCVGQCSDVKFTIQG--------VIDLHGADLVLGVAWQEALGEI 213 P+ V+VGNG L C C D ++Q ++ + GAD++LG+ W + LG I Sbjct: 388 PTNPLRVLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPI 447 Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSLIEPISASNLAKFSQRDEVSQFF 363 ++ +KF G+ V L + PISA+ + + Q + S F Sbjct: 448 TTDYTSLIMKFHHLGQPVELHVDADHG-PHPISATQIKRMIQTNATSALF 496 Score = 27.7 bits (60), Expect(2) = 9e-07 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 3 SHNFIQTRVAKFLGLTITPVNSI 71 +HNF+Q R+A FL L P N + Sbjct: 370 THNFLQPRLATFLHLPTVPTNPL 392 >ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max] Length = 1273 Score = 51.6 bits (122), Expect(2) = 2e-06 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Frame = +1 Query: 58 PSTQFSVIVGNGQNLKCVGQCSDVKFTIQG--------VIDLHGADLVLGVAWQEALGEI 213 PS F V+V NG + +G ++ QG ++ + GADL+LG W + LG Sbjct: 353 PSPLFKVMVDNGNYMTPIGMIRELSIQAQGNRFQLPVFLLPISGADLILGAIWLKTLGSH 412 Query: 214 *INFQKSYLKFILDGKEVCLQGN 282 ++ +KF+ DGK + LQG+ Sbjct: 413 IADYDSLQIKFLHDGKFITLQGD 435 Score = 26.2 bits (56), Expect(2) = 2e-06 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 3 SHNFIQTRVAKFLGLTITP 59 S NF+Q RVAKF L I P Sbjct: 335 SDNFLQPRVAKFFKLPIEP 353 >emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera] Length = 522 Score = 57.4 bits (137), Expect = 3e-06 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%) Frame = +1 Query: 58 PSTQFSVIVGNGQNLKCVGQCSDVKFTIQGV--------IDLHGADLVLGVAWQEALGEI 213 P+ F V V NGQ LKC G+ ++ +QG+ + L+G DLVLGV W E LG + Sbjct: 358 PTAPFHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLEQLGSV 417 Query: 214 *INFQKSYLKFILDGKEVCLQGNHSRSL 297 ++++ ++F K LQG+ +++L Sbjct: 418 VCDWKQMTMEFQWANKPRLLQGSRAQNL 445