BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046639
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    74   9e-12
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    74   1e-11
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    71   1e-10
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    71   1e-10
emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulga...    68   9e-10

>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/106 (35%), Positives = 60/106 (56%)
 Frame = -2

Query: 318 MPLSHSNIANNASAEKEMSMFNLWHNNL*HVSKGILTKIADTRVTIKETDDNAQVCVTCP 139
           M +  +N++ NA  +      + WHN L H S   L  I+++  T K  +  +  C  C 
Sbjct: 399 MDVEDTNVSVNAVVD-----ISTWHNRLRHASLQRLDVISESLGTTKHKNKGSDYCHVCH 453

Query: 138 LAKFPQLSCDQSSSHASTIFELVHLDTWGPYTVHTREKYKYFLTIV 1
           LAK  +LS    ++  + IFE++H+D WGP++V T + Y+YFLTIV
Sbjct: 454 LAKHRKLSFPSQNNVCNEIFEMLHIDIWGPFSVETVDGYQYFLTIV 499


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/85 (42%), Positives = 50/85 (58%)
 Frame = -2

Query: 255 NLWHNNL*HVSKGILTKIADTRVTIKETDDNAQVCVTCPLAKFPQLSCDQSSSHASTIFE 76
           ++WH  L H S   L  I+D+  T +  +  +  C  C LAK  +LS   S+     IF+
Sbjct: 556 SMWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFD 615

Query: 75  LVHLDTWGPYTVHTREKYKYFLTIV 1
           L+H+D WGP++V T E YKYFLTIV
Sbjct: 616 LLHIDVWGPFSVETVEGYKYFLTIV 640


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/85 (42%), Positives = 48/85 (56%)
 Frame = -2

Query: 255 NLWHNNL*HVSKGILTKIADTRVTIKETDDNAQVCVTCPLAKFPQLSCDQSSSHASTIFE 76
           +LWH  L H S   L KI++   T K  +     C  C LAK  +LS    +   +  F+
Sbjct: 516 SLWHKRLGHPSYTRLDKISEALGTTKHKNKGDAHCHVCHLAKQKKLSYSSQNHICTASFQ 575

Query: 75  LVHLDTWGPYTVHTREKYKYFLTIV 1
           L+H+D WGP++V T E YKYFLTIV
Sbjct: 576 LLHVDVWGPFSVETLEGYKYFLTIV 600


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/85 (38%), Positives = 51/85 (60%)
 Frame = -2

Query: 255 NLWHNNL*HVSKGILTKIADTRVTIKETDDNAQVCVTCPLAKFPQLSCDQSSSHASTIFE 76
           ++WH  L H S   L  +++   T +  +  +  C  C LAK  +LS   +++  ++ FE
Sbjct: 567 SVWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFE 626

Query: 75  LVHLDTWGPYTVHTREKYKYFLTIV 1
           L+H+D WGP++V T E YKYFLTIV
Sbjct: 627 LLHIDVWGPFSVETVEGYKYFLTIV 651


>emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 266

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/71 (46%), Positives = 45/71 (63%)
 Frame = -2

Query: 213 LTKIADTRVTIKETDDNAQVCVTCPLAKFPQLSCDQSSSHASTIFELVHLDTWGPYTVHT 34
           + KI +  V  + T   A+VC+TCP AK  ++   +S S A  IF+L+HLD WGPY V T
Sbjct: 4   IRKIPELSVLHQHT---AEVCITCPRAKMTKVEYKRSMSRAKEIFDLIHLDIWGPYKVMT 60

Query: 33  REKYKYFLTIV 1
           R   +YF+TIV
Sbjct: 61  RTHCRYFMTIV 71