BLASTX nr result

ID: Cnidium21_contig00046630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046630
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002893390.1| hypothetical protein ARALYDRAFT_472743 [Arab...    77   1e-12
ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|NP_564252.2| uncharacterized protein [Arabidopsis thaliana] ...    75   5e-12
ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|222852085|gb|EEE89632.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
 Frame = -3

Query: 266 MELSSGPSPR--LNSISTHNNDTYDSSDVQLDKDDLNHHHH--FASKSALEILRETVRIL 99
           ME+SSG SPR  L+ +    ++     + +LD  D N  H+  F S SAL+ILRET RIL
Sbjct: 1   MEVSSGASPRMSLDQLQKEGSEETHLQNFELDSFDYNDSHNLQFYSTSALDILRETARIL 60

Query: 98  RYNLSGFMAITAVLICPVSALLLSNFLVDHRL 3
           R N   FM I A+LICPVSA+LLSN LVD  +
Sbjct: 61  RCNSWSFMTIAALLICPVSAILLSNVLVDQSI 92


>ref|XP_002893390.1| hypothetical protein ARALYDRAFT_472743 [Arabidopsis lyrata subsp.
           lyrata] gi|297339232|gb|EFH69649.1| hypothetical protein
           ARALYDRAFT_472743 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/52 (76%), Positives = 41/52 (78%)
 Frame = -3

Query: 158 HHHFASKSALEILRETVRILRYNLSGFMAITAVLICPVSALLLSNFLVDHRL 3
           H  F S +ALEILRETVRILRYNL  FM  TAVLICPVSALLL NFLVD  L
Sbjct: 19  HKQFHSSNALEILRETVRILRYNLGAFMITTAVLICPVSALLLPNFLVDQSL 70


>ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis]
           gi|223538377|gb|EEF39984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
 Frame = -3

Query: 254 SGPSPRLNSISTHNNDTYDSSDVQL--------DKDDLNHHHHFASKSALEILRETVRIL 99
           SG +P   ++S        SSD Q+        D +D +++H F S +ALEILRETVRIL
Sbjct: 4   SGVAPSRRNLSLDQFQKEGSSDAQVQSFELGLYDDNDGHNNHQFHSMNALEILRETVRIL 63

Query: 98  RYNLSGFMAITAVLICPVSALLLSNFLVDHRL 3
           R N S FM I A+LICPVSA++LSN  VD  +
Sbjct: 64  RCNSSSFMIIAALLICPVSAIVLSNVFVDQSI 95


>ref|NP_564252.2| uncharacterized protein [Arabidopsis thaliana]
           gi|9295718|gb|AAF87024.1|AC006535_2 T24P13.3
           [Arabidopsis thaliana] gi|332192593|gb|AEE30714.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 335

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/52 (75%), Positives = 40/52 (76%)
 Frame = -3

Query: 158 HHHFASKSALEILRETVRILRYNLSGFMAITAVLICPVSALLLSNFLVDHRL 3
           H  F S +ALEILRETVRILRYNL   M  TAVLICPVSALLL NFLVD  L
Sbjct: 19  HKQFHSSNALEILRETVRILRYNLGALMLTTAVLICPVSALLLPNFLVDQSL 70


>ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|222864066|gb|EEF01197.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -3

Query: 236 LNSISTHNNDTYDSSDVQLDKDDLN--HHHHFASKSALEILRETVRILRYNLSGFMAITA 63
           L+ +    ++     + +L+  D +  H+H F S SALEILRETVRILR N   FM I A
Sbjct: 3   LDQLQKEGSEETHLQNSELESSDFSDRHNHQFHSMSALEILRETVRILRCNSWSFMTIAA 62

Query: 62  VLICPVSALLLSNFLVDHRL 3
           +LICPVSA+LLSN LVD  +
Sbjct: 63  LLICPVSAILLSNVLVDQSI 82


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