BLASTX nr result

ID: Cnidium21_contig00046593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046593
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300362.1| multidrug resistance protein ABC transporter...   117   1e-24
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   103   2e-20
emb|CBI39703.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   100   1e-19
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...    98   8e-19

>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1488

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/106 (50%), Positives = 74/106 (69%)
 Frame = +1

Query: 25  GINGSEKEGFKNYTIRLSCYRLTLFCSLILSVFGLVVCLLNSFYWYKNGWSTTNILVLLD 204
           G+ GS KE F N   R   Y+ TLFCSL +S   LV+ L++ FYWY NGWS   ++ LLD
Sbjct: 43  GVQGS-KERFSNNK-RFFFYKQTLFCSLGVSSLNLVLSLVSYFYWYTNGWSDDKLVTLLD 100

Query: 205 SVLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
            VL A++W A++ YL+TQL + GE ++P +LR+WW +FF +SCYCL
Sbjct: 101 FVLTALSWAALSVYLHTQLFNSGETKFPFLLRVWWALFFSISCYCL 146


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/105 (42%), Positives = 64/105 (60%)
 Frame = +1

Query: 28  INGSEKEGFKNYTIRLSCYRLTLFCSLILSVFGLVVCLLNSFYWYKNGWSTTNILVLLDS 207
           ING   E +K    R   Y+ T  C   LS+    +C LN FYWY+NGWS   ++ LLD 
Sbjct: 40  INGGALENYKR--TRFLYYKQTFACCQGLSLLNFFLCFLNYFYWYRNGWSGEKLVTLLDL 97

Query: 208 VLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
           VL+ ++W A++ YL+TQ     E ++P +LR+WW  +F +SCYCL
Sbjct: 98  VLRTLSWGAVSVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCL 142


>emb|CBI39703.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/105 (44%), Positives = 64/105 (60%)
 Frame = +1

Query: 28  INGSEKEGFKNYTIRLSCYRLTLFCSLILSVFGLVVCLLNSFYWYKNGWSTTNILVLLDS 207
           I GS  E  K+   R   Y+ T  CS  LS+    +C LN FYWY+NGWS   ++ LLD 
Sbjct: 46  IKGSALENCKS--TRSLSYKQTFACSQGLSLLNFFLCFLNYFYWYRNGWSDEKLVTLLDL 103

Query: 208 VLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
           VL+ +AW A+  YL+TQ     E ++P +LR+WW  +F +SCYCL
Sbjct: 104 VLRTLAWGAVCVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCL 148


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/105 (42%), Positives = 62/105 (59%)
 Frame = +1

Query: 28  INGSEKEGFKNYTIRLSCYRLTLFCSLILSVFGLVVCLLNSFYWYKNGWSTTNILVLLDS 207
           ING   E  K    R   Y+ T  C   LS+    +C LN FYWY+NGWS   ++ LLD 
Sbjct: 40  INGGALENCKR--TRFLYYKQTFACCQGLSLLNFFLCFLNYFYWYRNGWSGEKLVTLLDL 97

Query: 208 VLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
           VL+ ++W A+  YL+TQ     E ++P +LR+WW  +F +SCYCL
Sbjct: 98  VLRTLSWGAVCVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCL 142



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = +1

Query: 163  KNGWSTTNILVLLDSVLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
            +NGWS   ++ LLD VL+ +AW A+  YL+TQ     E ++P +LR+WW  +F +SCYCL
Sbjct: 1028 QNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYCL 1087


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/105 (42%), Positives = 62/105 (59%)
 Frame = +1

Query: 28  INGSEKEGFKNYTIRLSCYRLTLFCSLILSVFGLVVCLLNSFYWYKNGWSTTNILVLLDS 207
           I G   E  K    R   Y+ T  C   LS+  L++C LN FYWY+NGWS   ++ LLD 
Sbjct: 40  IKGGAPENCKR--TRFLYYKQTFACCQGLSLLNLLLCFLNYFYWYRNGWSDERLVTLLDL 97

Query: 208 VLKAIAWLAITTYLYTQLSSVGEVQYPLVLRIWWCVFFLVSCYCL 342
           VL+ +AW A+  YL+TQ     E ++P +LR+WW  +F +SCY L
Sbjct: 98  VLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYFL 142


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