BLASTX nr result

ID: Cnidium21_contig00046517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046517
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   124   8e-27
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   124   1e-26
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   123   1e-26
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]   123   1e-26
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   123   1e-26

>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/110 (53%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    QNSRVERKHRNILEMARALRFQSGVDLKYWGECVMTTVYIINRLPTRVLEYKVPYEALFA 180
            QN  VERKHR+IL++ARAL+FQ+ +  ++WGEC +T V+IINRLP+ VL +K P+E L+ 
Sbjct: 700  QNGVVERKHRHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYL 759

Query: 181  EAVDYSKFRVFRCLAFAV-LSVSDKFAGKAIPCVFMGYPPTQKGYKVLDL 327
            +   YS  RVF CLA+A  + VS KF  +AI C+F+GYP  QK YK+ +L
Sbjct: 760  KPPTYSHLRVFGCLAYATNVHVSHKFDHRAIACIFIGYPVGQKAYKLFNL 809


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   QNSRVERKHRNILEMARALRFQSGVDLKYWGECVMTTVYIINRLPTRVLEYKVPYEALFA 180
           QNS VERKH+++L +AR+L FQS V L+YW +CV+T  Y+INRLP+ +L+ K P+E L  
Sbjct: 653 QNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFELLLK 712

Query: 181 EAVDYSKFRVFRCLAFAVLSVSD--KFAGKAIPCVFMGYPPTQKGYKVLDLHSHS 339
           +  DY+  +   CL +A  +V D  KF+ +A PCVF+GYP   KGYKVLDL SHS
Sbjct: 713 KIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHS 765


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   QNSRVERKHRNILEMARALRFQSGVDLKYWGECVMTTVYIINRLPTRVLEYKVPYEALFA 180
           QN  VERKHR+ILE ARA RFQ+ + L +W ECV T V+IINRLPT +L  + P+E L+ 
Sbjct: 554 QNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYG 613

Query: 181 EAVDYSKFRVFRCLAFAV-LSVSDKFAGKAIPCVFMGYPPTQKGYKVLDLHSH 336
           +   YS  RVF CLA+A  + V  KFA +A  C+F+GYP  QK YK+ DL +H
Sbjct: 614 KLPSYSHIRVFGCLAYATNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTH 666


>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
          Length = 1114

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   QNSRVERKHRNILEMARALRFQSGVDLKYWGECVMTTVYIINRLPTRVLEYKVPYEALFA 180
           QN  VERKHR+ILE ARA RFQ+ + L +W ECV T V+IINRLPT +L  + P+E L+ 
Sbjct: 548 QNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTXVHIINRLPTPLLSRQTPFERLYG 607

Query: 181 EAVDYSKFRVFRCLAFAV-LSVSDKFAGKAIPCVFMGYPPTQKGYKVLDLHSH 336
           +   YS  RVF CLA+A  + V  KFA +A  C+F+GYP  QK YK+ DL +H
Sbjct: 608 KLPSYSHIRVFGCLAYATNVHVPHKFAPRAKRCIFLGYPVXQKAYKLYDLDTH 660


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   QNSRVERKHRNILEMARALRFQSGVDLKYWGECVMTTVYIINRLPTRVLEYKVPYEALFA 180
           QN  VERKHR+ILE ARA RFQ+ + L +W ECV T V+IINRLPT +L  + P+E L+ 
Sbjct: 577 QNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYG 636

Query: 181 EAVDYSKFRVFRCLAFAV-LSVSDKFAGKAIPCVFMGYPPTQKGYKVLDLHSH 336
           +   YS  RVF CLA+A  + V  KFA +A  C+F+GYP  QK YK+ DL +H
Sbjct: 637 KLPSYSHIRVFGCLAYATNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTH 689


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